VIMSS98395 has 286 amino acids
Query: PDH_N [M=154]
Accession: PF02153.21
Description: Prephenate dehydrogenase, nucleotide-binding domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.7e-12 32.2 0.2 5.5e-12 31.6 0.2 1.2 1 VIMSS98395
Domain annotation for each sequence (and alignments):
>> VIMSS98395
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 31.6 0.2 5.5e-12 5.5e-12 2 114 .. 16 127 .. 15 135 .. 0.89
Alignments for each domain:
== domain 1 score: 31.6 bits; conditional E-value: 5.5e-12
PDH_N 2 aralrrkgfkvtvigydideekakaalelglvdeatddieavkeadivllavPve.vilevlkelaphlkedalitDvgsvKekvvkelekllk..gks 97
a l++ g +v v+ ++ ++ ++ a ++ g+ +e eav a++vll+v + +++ ++++ p++ e+ +i+D + + +kv++e+ +l + g
VIMSS98395 16 AGHLKAAGHEVAVYNRSPEKARRWAEKHGGAAFETIA--EAVAGAEVVLLCVGNDdDVRDLVAQVLPAMGEGGVIVDHTTTSAKVAREMAALAAqsGRA 112
889********************9999*******999..7************975279*********************************99884555 PP
PDH_N 98 fvgghPmaGteksGvda 114
fv +P+ G+ + G +
VIMSS98395 113 FV-DAPVSGG-QAGAES 127
55.5799999.666665 PP
Or compare VIMSS98395 to CDD or PaperBLAST