VIMSS98950 has 899 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.21
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-124 400.9 0.0 2.6e-124 400.1 0.0 1.4 1 VIMSS98950
Domain annotation for each sequence (and alignments):
>> VIMSS98950
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 400.1 0.0 2.6e-124 2.6e-124 2 273 .] 597 872 .. 596 872 .. 0.98
Alignments for each domain:
== domain 1 score: 400.1 bits; conditional E-value: 2.6e-124
Met_synt_B12 2 leelveyidWtpffqaWelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpAnsegddievyadesrseelatlhtLrqqae 98
l+elv++idW+pff++Wel g++p+iled++vg++a++l++dA+amL+k++eek++ ak+v+g++pA+++gddi++y+de+r +e +lhtLrqq++
VIMSS98950 597 LAELVPFIDWSPFFASWELIGRFPQILEDDVVGQAATDLYRDARAMLDKVVEEKWFGAKGVIGFWPAQAQGDDIVLYTDETRVAEFSRLHTLRQQMD 693
89*********************************************************************************************99 PP
Met_synt_B12 99 ke.....egkpnlclaDfvapkesgvkDyiGlFavtaglgieelakefeaekddYsailvkaladrLaeAfaellhekvrkelWgyakdeklsneel 190
k e k+n++l+Dfvap +g +Dy+G+Favtag+g +e++++f+a+ ddY+ai++ aladrLaeAfae+lh k r elWgya+de+ ++e+l
VIMSS98950 694 KGadksgEAKANVALSDFVAPIGQG-ADYVGGFAVTAGHGEDEIVAKFKAAGDDYNAIMASALADRLAEAFAEWLHYKARVELWGYAADEDADVERL 789
886666777899*********9998.7********************************************************************** PP
Met_synt_B12 191 ikekYqgiRpApGYpacpdhtekktlfelldaeekigieLteslamtPaasvsGlyfahpearyFavgkiekdqvedyakrkg 273
i+ekYqgiRpApGYpa+pdhtek tlf+lldae+++g++Ltes+amtP a+vsGl+f+h +a+yF+vgki+ dqvedya+rkg
VIMSS98950 790 IAEKYQGIRPAPGYPAQPDHTEKGTLFKLLDAEAATGLQLTESYAMTPGAAVSGLFFSHRQAHYFGVGKIDADQVEDYARRKG 872
*********************************************************************************97 PP
Or compare VIMSS98950 to CDD or PaperBLAST