PaperBLAST – Find papers about a protein or its homologs

 

Align W5NVV3 to PF12478 (UBAP2-Lig)

W5NVV3 has 1087 amino acids

Query:       UBAP2-Lig  [M=33]
Accession:   PF12478.12
Description: UBAP2/protein lingerer
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------
    2.4e-20   58.7   0.2    5.4e-20   57.6   0.2    1.7  1  W5NVV3    


Domain annotation for each sequence (and alignments):
>> W5NVV3  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.6   0.2   5.4e-20   5.4e-20       2      33 .]     495     526 ..     495     526 .. 0.97

  Alignments for each domain:
  == domain 1  score: 57.6 bits;  conditional E-value: 5.4e-20
  UBAP2-Lig   2 pSkIPasAVEMPgdanissLDVQFGaldFGse 33 
                +SkIPa AVEMPg+a+is+L++QFGal+FGse
     W5NVV3 495 TSKIPALAVEMPGSADISGLNLQFGALQFGSE 526
                5******************************8 PP



Or compare W5NVV3 to CDD or PaperBLAST