PaperBLAST – Find papers about a protein or its homologs

 

Align WP_000372818.1 to PF04341 (DUF485)

WP_000372818.1 has 110 amino acids

Query:       DUF485  [M=88]
Accession:   PF04341.17
Description: Protein of unknown function, DUF485
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.6e-34  102.3   0.2    6.6e-34  102.1   0.2    1.0  1  WP_000372818.1  


Domain annotation for each sequence (and alignments):
>> WP_000372818.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.1   0.2   6.6e-34   6.6e-34       2      86 ..      11      96 ..      10      98 .. 0.96

  Alignments for each domain:
  == domain 1  score: 102.1 bits;  conditional E-value: 6.6e-34
          DUF485  2 aspkFqeLvrkrrrfafpltalflvvYflfvlliafapellatkvg.gnitvgillGllqfvltfvltgiYvrrAnrefDplaeei 86
                    ++pkFq++v+k++ ++++lt+++lv+Y++f+ll+++++e+l    + g++t+gi+lGl+++vl+f+l+g+Y++ An+++D+l+ee 
  WP_000372818.1 11 RNPKFQKMVKKKSALSWTLTIIMLVLYVGFMLLVGYNKEFLMSSFSgGVTTWGIPLGLGIIVLSFLLCGVYSYIANNTLDQLSEEA 96
                    69********************************************66**********************************9985 PP



Or compare WP_000372818.1 to CDD or PaperBLAST