PaperBLAST – Find papers about a protein or its homologs

 

Align WP_000490276.1 to PF07043 (DUF1328)

WP_000490276.1 has 53 amino acids

Query:       DUF1328  [M=39]
Accession:   PF07043.18
Description: Protein of unknown function (DUF1328)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.9e-18   51.9  23.6    4.6e-18   51.7  23.6    1.1  1  WP_000490276.1  


Domain annotation for each sequence (and alignments):
>> WP_000490276.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   51.7  23.6   4.6e-18   4.6e-18       1      39 []       6      44 ..       6      44 .. 0.99

  Alignments for each domain:
  == domain 1  score: 51.7 bits;  conditional E-value: 4.6e-18
         DUF1328  1 iiFlviAliAgvlGFgGiAgaaagIAkiLFviFlvlfvv 39
                    iiFlviAliA++lGFgG+Ag+aag Aki+Fv+++vlf+v
  WP_000490276.1  6 IIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIVLFLV 44
                    8************************************98 PP



Or compare WP_000490276.1 to CDD or PaperBLAST