WP_000646543.1 has 687 amino acids
Query: GmrSD_N [M=199]
Accession: PF03235.19
Description: GmrSD restriction endonuclease, N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-43 135.3 8.0 1.5e-43 135.3 8.0 3.9 3 WP_000646543.1
Domain annotation for each sequence (and alignments):
>> WP_000646543.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 135.3 8.0 1.5e-43 1.5e-43 3 198 .. 10 219 .. 8 220 .. 0.73
2 ? 0.2 0.3 0.038 0.038 101 154 .. 230 288 .. 222 338 .. 0.59
3 ? -10.4 13.3 1 1 183 183 .. 518 518 .. 346 645 .. 0.61
Alignments for each domain:
== domain 1 score: 135.3 bits; conditional E-value: 1.5e-43
GmrSD_N 3 dllskeksg.fliPdyQRgyvWdeeqvedLiedike......lrgyplGsivlw..keaededgkyeviDGQQRltTltlllka........... 77
d++ k++++ f+iP yQR y+W++eq+++L++di + ++g+++Gsiv++ ++++ +++ +iDGQQRltT+tll+ a
WP_000646543.1 10 DFIGKSQEKqFVIPIYQRVYSWEKEQCKQLWDDIIKtggndqIEGHFIGSIVFVhdGIYTTNYNELLIIDGQQRLTTITLLFIAlrdhlndevkr 104
5566666666*******************************************965445555**********************66655444433 PP
GmrSD_N 78 .leed......ekekeeeeklklekreedkdffekllenekeelesleklkelngkkfkdlseeekseseknlikayelikek..........ai 155
++ ++ +k++l +e+d+d + +l++++k + ++ +++++++l++e+ ++
WP_000646543.1 105 kE--IedhyliNSGNDGDKKIRLILSESDRDTLLSLIDKDKRKPSE----------------------LSLKIMENFKLFEEWirkntdkletIF 175
21..033444566666666666667777777777777777666544......................444444444444444444455444311 PP
GmrSD_N 156 ...eklklveieldseddedeafeiFerlNsrGvpLsaadllkall 198
ekl +v+i l++ ++d+ + iFe++Ns+G++L+++dl+++++
WP_000646543.1 176 kglEKLMIVWIALKK--EKDDPQLIFESMNSKGIELTQTDLIRNYI 219
3448899*******5..5669***********************97 PP
== domain 2 score: 0.2 bits; conditional E-value: 0.038
GmrSD_N 101 dffekllenekeelesleklkelngkkfkdlseeekseseknlikayelikek.........a 154
df++++++ +e ++++e+l ++ ++ ++ k+ +n+ k+ye++k++ a
WP_000646543.1 230 DFYNQYWRAMEEDFKQNETLFNRFVRHYLTI----KTGDIPNISKVYEAFKRYqqergieteA 288
4555555555555444444444443333333....5666666666666666654444444441 PP
== domain 3 score: -10.4 bits; conditional E-value: 1
GmrSD_N 183 s 183
+
WP_000646543.1 518 Q 518
1 PP
Or compare WP_000646543.1 to CDD or PaperBLAST