PaperBLAST – Find papers about a protein or its homologs

 

Align WP_000753036.1 to PF07290 (YqiJ_OB)

WP_000753036.1 has 202 amino acids

Query:       YqiJ_OB  [M=64]
Accession:   PF07290.15
Description: Inner membrane protein YqiJ, OB-fold
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-21   62.4   0.0    2.8e-21   61.7   0.0    1.3  1  WP_000753036.1  


Domain annotation for each sequence (and alignments):
>> WP_000753036.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   61.7   0.0   2.8e-21   2.8e-21       2      63 ..     130     189 ..     129     189 .. 0.92

  Alignments for each domain:
  == domain 1  score: 61.7 bits;  conditional E-value: 2.8e-21
         YqiJ_OB   2 lvGrvatitlGtArrgspAeAkvkDehgqtHYvmVEPdeedevfeeGseVllvrkegalfra 63 
                     l+Gr+ati+ G Ar g +A+A+v+De+gq HYv+VEP+  +   e  s+V+l++ ++ ++ a
  WP_000753036.1 130 LLGRLATISSGSARPGFSAQARVRDEFGQLHYVQVEPEYGEL--ELYSQVILIKVHKSHYVA 189
                     89***********************************99766..67799****999999976 PP



Or compare WP_000753036.1 to CDD or PaperBLAST