WP_001051765.1 has 527 amino acids
Query: GmrSD_N [M=199]
Accession: PF03235.19
Description: GmrSD restriction endonuclease, N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-38 119.2 1.3 1.3e-38 119.2 1.3 2.8 2 WP_001051765.1
Domain annotation for each sequence (and alignments):
>> WP_001051765.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 119.2 1.3 1.3e-38 1.3e-38 1 197 [. 13 219 .. 13 221 .. 0.73
2 ? -1.3 2.9 0.11 0.11 92 151 .. 350 404 .. 225 523 .. 0.66
Alignments for each domain:
== domain 1 score: 119.2 bits; conditional E-value: 1.3e-38
GmrSD_N 1 ledllskeksg.fliPdyQRgyvWdeeqvedLiedikelrgyplGsivlw.................keaededgkyeviDGQQRltTltlllka 77
+e+l sk+ +g ++iP +QRg+vW++eqv dL+++i +++yp+Gsi+lw +e++ e ++ +++DGQQR+tT++ ++++
WP_001051765.1 13 IEKLRSKILDGeIKIPPFQRGFVWKQEQVIDLLDSI--YNDYPVGSILLWettedlpsarniggfvlPEVTAEYPRSYILDGQQRVTTIFGVFCE 105
6788888888899***********************..*****************************999999********************** PP
GmrSD_N 78 ............leedekekeeeeklklekreedkdffekllenekeelesleklkelngkkfkdlseeekseseknlikayelikekaieklkl 160
l + ++ ++ +e++ +kl+++ + ++ l + +++f+ + +e+++ +++ +l+++ ++l
WP_001051765.1 106 glpqeaadfiadL--------NLFEIYFDFDEKKFVHESKLINTHVNLKLRLLFN----NFDFNMEIGKYTREQQRLAVELQSLFQN-----YEL 183
6554433332220........1111222222222222234444444444443222....2233333444456677777777777765.....777 PP
GmrSD_N 161 veieldseddedeafeiFerlNsrGvpLsaadllkal 197
+ +++++ +++e+ iFer+N++G++Ls+ dl+ a+
WP_001051765.1 184 PLVTIKK-REKEEVGIIFERINNTGTQLSTLDLMVAW 219
8787776.67799********************9887 PP
== domain 2 score: -1.3 bits; conditional E-value: 0.11
GmrSD_N 92 klekreedkdffekllenekeelesleklkelngkkfkdlseeekseseknlikayelik 151
+ e + d ff+++l n+ +le ++ + ++ ++l ++s+ n+ +++ l+
WP_001051765.1 350 TDEAMDNDITFFDSVLANDFSSLERYQSSLPTRFLETQTL-----TKSNANVRSILLLFS 404
2233334444444444444444444333333333333333.....555555555555554 PP
Or compare WP_001051765.1 to CDD or PaperBLAST