WP_002459104.1 has 376 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.5e-59 185.9 0.0 4.7e-59 185.5 0.0 1.2 1 WP_002459104.1
Domain annotation for each sequence (and alignments):
>> WP_002459104.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 185.5 0.0 4.7e-59 4.7e-59 1 196 [. 161 367 .. 161 368 .. 0.96
Alignments for each domain:
== domain 1 score: 185.5 bits; conditional E-value: 4.7e-59
UPF0020 1 RgyRvfngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvye............lkaeaeeear..aelklyg 81
RgyR ++g+ap+ketLAa+l++la+w+ ++pl+DP+CGsGti+IEa+l+++niapg++refv+e l++ea ++a +e+++y+
WP_002459104.1 161 RGYRLAQGEAPIKETLAASLIKLANWTGQTPLIDPFCGSGTIAIEACLIAQNIAPGFNREFVSEawhiipedlyekLRNEADQQADydKEVEVYA 255
9**************************************************************************99999999999767777*** PP
UPF0020 82 sDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtnpPYGerlgskkalekLYseflrelkrvlrgggrlvlltaenkalekal 176
D+d+ +++ a++Na + g++d+i+f+++d+ L+ ++e ++++npPYGer+g+ +++e++Y+ +++ ++++ + +++++nk++e ++
WP_002459104.1 256 YDIDPYMIEIAKRNAAEVGLSDIIQFEVKDVNTLTIHREEPMALIGNPPYGERIGDREEVETMYRYIGKLMAQHPFL---STYILTSNKEFEFLA 347
***********************************7777888*****************************996554...89************* PP
UPF0020 177 eeralrkvkeknvklglllk 196
+++a++++k++n+++++ ++
WP_002459104.1 348 NRKATKRRKLFNGYIECNYY 367
*****************875 PP
Or compare WP_002459104.1 to CDD or PaperBLAST