WP_002824330.1 has 376 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-54 169.9 0.0 4.1e-54 169.4 0.0 1.2 1 WP_002824330.1
Domain annotation for each sequence (and alignments):
>> WP_002824330.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 169.4 0.0 4.1e-54 4.1e-54 1 195 [. 163 367 .. 163 369 .. 0.96
Alignments for each domain:
== domain 1 score: 169.4 bits; conditional E-value: 4.1e-54
UPF0020 1 RgyRvfngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvye............lkaeaeeearaelk..lyg 81
RgyR g+apLke+ Aaalv l++w ++p++DP CGsGti+IEaal+g+niapg +r+f +e +++ea a+++++ + g
WP_002824330.1 163 RGYRTEHGGAPLKENFAAALVLLTNWFTDNPFVDPVCGSGTIPIEAALIGKNIAPGINRTFEIEswawfdkklsqdVREEADSLAKYDQPldISG 257
9***********************************************************************99999999999999777777*** PP
UPF0020 82 sDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtnpPYGerlgskkalekLYseflrelkrvlrgggrlvlltaenkalekal 176
D+d ++++ ++eNa+kag+ + i+f+q+ +++ + +++ ++++v+npPYG+rlg+ ++ +++Y+++++ ++ + + ++ +++++++++e+++
WP_002824330.1 258 YDIDGNMIRISKENAKKAGLYNDIAFKQLAVKDWQ-TDKINGILVANPPYGQRLGEIEDARQIYQQMGSIYNQ-MPT--WSKYILTSDEKFEQFY 348
***********************************.77799***************************99888.999..**************** PP
UPF0020 177 eeralrkvkeknvklglll 195
+++a++k+k++n+++ ++l
WP_002824330.1 349 GKKATKKRKLYNGPIRTDL 367
*************998765 PP
Or compare WP_002824330.1 to CDD or PaperBLAST