WP_002872709.1 has 456 amino acids
Query: Portal_Mu [M=336]
Accession: PF06074.18
Description: Portal protein of Mu bacteriophage
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3e-61 193.6 0.0 4.4e-61 193.0 0.0 1.2 1 WP_002872709.1
Domain annotation for each sequence (and alignments):
>> WP_002872709.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 193.0 0.0 4.4e-61 4.4e-61 6 336 .] 39 346 .. 38 346 .. 0.88
Alignments for each domain:
== domain 1 score: 193.0 bits; conditional E-value: 4.4e-61
Portal_Mu 6 dml.rDahlssvlqkRklavlsleweiepgddddedeeaadllrelerpwfedllkdlldaifyGysvlEivWerdggkwlprklvardprverw 99
+m +D +++ q+R++ +l++e++i+ ++++ ++ ++ + dll+++l++ +yG +v+E+ ++ ++g ++p l+ rd r ++
WP_002872709.1 39 KMIfKDLSFTQAHQSRRSVILAKELQIVCENEKIKES-----FEY---LFNPDLLSQILETYLYGLNVFEVNYKLKDGFYYPI-LKQRDFR--NF 122
56669**********************6666666655.....555...5669*******999*****************9886.8888666..77 PP
Portal_Mu 100 ffdrdgglrlltrestege..elpprkflvhrhkaksgnpyglgllrklawpvlfKrgglkdwaeflekfGmPlrvgkypagdeekeklleeala 192
f+++++l + + +g ++++k ++ ++++ + g +ll kl++pv +K+ +lk+w+efle+fG+P++v+k++++ ++ l+ +
WP_002872709.1 123 GFNENDELVY----NGNGCeeIVEDKKAIYGLFGSNFLFKNGDALLTKLYFPVKLKNASLKFWMEFLERFGSPWAVAKTDSDPDA----LASEIH 209
7***999999....777767577778888777777777677***************************************96555....66699* PP
Portal_Mu 193 algsdaaavipegmeielleeaksgsgdvfealieycdeeiskailGqtlttdsggGsralgevheevredileaDarllaetlnrqlipplvel 287
++ ++ avi++++e++l+ + +++ ++++i+y+d++i ++lG++l+++ +gGs+a++e h+++r+d+++ D + + +lnr + + + e+
WP_002872709.1 210 QMLNGDSAVIDKEEELDLI---QPKAKANYNEIIDYLDNQIRSVVLGANLSSQVSGGSLAAAESHNQIRKDLAAQDGQIVLFILNRAI-KFFKEI 300
*******************...7788899***********************************************************.****** PP
Portal_Mu 288 n.fgpgaeaprfvfdeeeeedlkalaerdkklvdaGlevdeeyirekygl 336
n f+ ++ + +f + e + +l erd kl ++G+ +deeyi+ +y++
WP_002872709.1 301 NhFK-DELYVQFFSEA---EPKSELCERDLKLFNMGFCFDEEYIKSTYNV 346
*555.66666665444...55888888*********************85 PP
Or compare WP_002872709.1 to CDD or PaperBLAST