PaperBLAST – Find papers about a protein or its homologs

 

Align WP_002872709.1 to PF06074 (DUF935)

WP_002872709.1 has 456 amino acids

Query:       DUF935  [M=517]
Accession:   PF06074.16
Description: Protein of unknown function (DUF935)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      7e-43  133.1   0.0    8.7e-43  132.8   0.0    1.0  1  WP_002872709.1  


Domain annotation for each sequence (and alignments):
>> WP_002872709.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  132.8   0.0   8.7e-43   8.7e-43     107     516 ..      70     454 ..      56     455 .. 0.89

  Alignments for each domain:
  == domain 1  score: 132.8 bits;  conditional E-value: 8.7e-43
          DUF935 107 davrelledldnledllfdllDAigkGfsvlEieWetsggewvpkalewrdprwfqfdredrnelrlrdateegeelppfkfvvhrhkaksglpi 201
                     ++++e +e l n +dll  +l   ++G++v E++++ ++g  +p  l+ rd r f f++  ++el  + ++   e +++ k ++    +      
  WP_002872709.1  70 EKIKESFEYLFN-PDLLSQILETYLYGLNVFEVNYKLKDGFYYPI-LKQRDFRNFGFNE--NDELVYNGNGC-EEIVEDKKAIYGLFGSNFLFKN 159
                     678899999999.9***************************9999.***********95..55677777776.89******************** PP

          DUF935 202 ragllrvlaWpylfknyslkdwaeFlEvYGlPlrlGkYpagAseeeketLlravasigsdAaaiiPesmeiefkeaakagssdlfealaewcdkq 296
                     +  ll  l +p+ +kn slk+w+eFlE +G+P+ + k     ++++ ++L++ + ++ +  +a+i ++ e+++++ +    ++ ++++++++d+q
  WP_002872709.1 160 GDALLTKLYFPVKLKNASLKFWMEFLERFGSPWAVAK-----TDSDPDALASEIHQMLNGDSAVIDKEEELDLIQPKA---KANYNEIIDYLDNQ 246
                     ***********************************98.....889******************************999...899*********** PP

          DUF935 297 iSkaiLGqTlTtdadggssnAlgkvhneVreDirdaDakqlaatlnrdlirplvalNfgsqerlPrfefdveepeDlkalaealekLvklGlrvp 391
                     i  ++LG +l+++ + g+s A+++ hn++r+D++ +D + +   ln   i+ + ++N  ++e + +f   ++e+e  ++l e++ kL ++G+ + 
  WP_002872709.1 247 IRSVVLGANLSSQVS-GGSLAAAESHNQIRKDLAAQDGQIVLFILN-RAIKFFKEINHFKDELYVQF---FSEAEPKSELCERDLKLFNMGFCFD 336
                     **************7.789***************************.789********988877444...56888888***************** PP

          DUF935 392 asevrdklglpepekdeevlkaaaaaepeaaaapaalaaaaalaaqaaaeaaeqdalDaladealaes.qaaleplla.pvlellqkaesleell 484
                     +++++ +++++ +   e++ k+  ++ ++ ++           +++ + e  e+d +D+ +++ +  + +++++++++ +  ++++++++++e+l
  WP_002872709.1 337 EEYIKSTYNVEGELIRETLEKKDFKDLENDKK---------VFENKVKLESFEEDFIDKGLEQKEYLKvDESMSKFFQeQFESIVKDCKDFNEAL 422
                     **********9998888888833222222222.........3456889999********998887766766666666516667899********* PP

          DUF935 485 arlaelypemdaeelaelLaralfvAdllGrl 516
                     ++l+e +++++++e+++ L  al ++ +lG l
  WP_002872709.1 423 NKLKENFSSLEQSEFEKHLFIALNNSSILGYL 454
                     *****************************986 PP



Or compare WP_002872709.1 to CDD or PaperBLAST