PaperBLAST – Find papers about a protein or its homologs

 

Align WP_003089183.1 to PF06980 (DUF1302)

WP_003089183.1 has 548 amino acids

Query:       DUF1302  [M=541]
Accession:   PF06980.17
Description: Protein of unknown function (DUF1302)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   3.3e-139  451.3   4.4   3.7e-139  451.1   4.4    1.0  1  WP_003089183.1  


Domain annotation for each sequence (and alignments):
>> WP_003089183.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  451.1   4.4  3.7e-139  3.7e-139       4     540 ..       6     547 ..       3     548 .] 0.93

  Alignments for each domain:
  == domain 1  score: 451.1 bits;  conditional E-value: 3.7e-139
         DUF1302   4 alaaalaallaagpaqAveseeddgvegsldttlsygagvrtedrdpsligkanggaa........asangddGnlnfdkgdlvsnrlkatseld 90 
                     + a +l+++++++ a+ + ++e++ ++gs+d+t+++g+g rte+r ++li+++  g +         s+ +d+G+ln+d+gd+++n lk+t+el 
  WP_003089183.1   6 TKASGLVIACTTPLAMGF-TFETETLNGSFDSTITAGMGLRTESRGCNLINQGPTGHNapsgclaqSSGVADQGDLNYDRGDMFTNYLKGTHELL 99 
                     56788999999*******.*******************************998888889************************************ PP

         DUF1302  91 lkyg.nygffvrgkafyDavydnknedesaaatnknsqagngdsddardeagrgaelldaYvygsfdlgdrplsvRlGrQvvnWGeslfvlnGin 184
                     lk   + +f++rg+++ D+++ +++ + s ++ ++ +++g   sddard+   +a+lld++v++ fd+g++ +++RlG+Qv+nWGeslfv +Gin
  WP_003089183.1 100 LKMPeDITFMARGTWIRDFAATDTTGTLSFNTPESVGSNGL--SDDARDDLAFKARLLDLWVSKGFDVGGQRVRARLGNQVINWGESLFVAGGIN 192
                     ****9**********************88666555555555..9*************************************************** PP

         DUF1302 185 qinplDvsklrrpGaelkeallPvpmvsaslqltdglsleafyqfeweptrlppvGtFfstsdivgpgaeglllangnaaaltgsaagtvvpraa 279
                      +n++D+++l rpG++lkea+lP+pm+s+  +l+ g+++ea+yqf+w++++lppvG+++st++++g+g   + +                    +
  WP_003089183.1 193 NTNAYDYQALARPGVQLKEAVLPAPMLSVASGLGSGVNVEAYYQFRWNKSELPPVGSYWSTTNALGEGRGDYGF--------------------S 267
                     ****************************************************************9999855543....................4 PP

         DUF1302 280 dkepsdsgqwGlalrylaeel.tefglyylnyhsrlPvlsgasaavdadnaayfleYpediklyGaSfnttlgggtavagEvsYrpdaplqvnta 373
                     +k+++dsgqwGl+lr+ +e++ + +g+y ++yh++lP+l++a   +++ +aa ++eY ed  +yG+S+n+ +g ++av++E+sYrp++ +++n +
  WP_003089183.1 268 EKDARDSGQWGLSLRWQPEDSdVAYGFYVMRYHDKLPSLRVAILDPNTFAAAPTWEYQEDRMMYGISANMPIG-DWAVGTELSYRPKDSVMLNPV 361
                     57899***********************************8888889999999*******************7.*******************99 PP

         DUF1302 374 dllaaalaptaplpleyvrgyergdvlqaqlg................lgadsltlvaEvavthvpdlpdde......gsdsaagnaagcaadgy 446
                       l+++         +  +++++++++q++l+                 ga+++ l++E++v  +p+l d+       ++ +a + +++ a + +
  WP_003089183.1 362 IDLCTG---------NGGKCWKDEKKFQWHLTglysftpsnsptlldfSGASTGSLLTELVVIKYPGLHDEVngeplaAGLNAWQLDPARAPKSR 447
                     998866.........789******************999999999998888********************9766666555555555599999** PP

         DUF1302 447 atrfswGyrlvleltynd.vlpgldlspsisfshdvkGnspdag..fveGrkavslgltfdyls.nwkvdlgytaffggddq..nalrDrDfvsl 535
                     ++++s G +l+++lty+  +lpg++++p +++++++ G++p+ +  f e++ +++l l+f  +  +w+++l+y +f gg+    +++rDrD+v++
  WP_003089183.1 448 GDKTSSGINLDFSLTYDGtLLPGWQVTPGVFYARSLGGRTPNLSatFTEDASSMNLYLNFVRNPaSWQISLNYAKFMGGETPydQLYRDRDYVGI 542
                     **********************************************99***********754435***************9899*********** PP

         DUF1302 536 svkys 540
                     +++++
  WP_003089183.1 543 AISRT 547
                     99976 PP



Or compare WP_003089183.1 to CDD or PaperBLAST