PaperBLAST – Find papers about a protein or its homologs

 

Align WP_004242567.1 to PF07351 (DUF1480)

WP_004242567.1 has 80 amino acids

Query:       DUF1480  [M=78]
Accession:   PF07351.17
Description: Protein of unknown function (DUF1480)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.3e-34  102.5   1.0    5.8e-34  102.3   1.0    1.0  1  WP_004242567.1  


Domain annotation for each sequence (and alignments):
>> WP_004242567.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  102.3   1.0   5.8e-34   5.8e-34       1      78 []       1      79 [.       1      79 [. 0.95

  Alignments for each domain:
  == domain 1  score: 102.3 bits;  conditional E-value: 5.8e-34
         DUF1480  1 msktklrisafeiddavlsseqkgert.lsiPcksdpdlcmqldawdeetsiPailngkdsllyrkhydrqkdawvmrv 78
                    m+kt+l+i+ +ei+d  l+   +++ t + iPc+ d+++cmqld+wde+tsiPa l++k++llyr+ yd++++ w+++v
  WP_004242567.1  1 MNKTTLKIACYEIEDVTLKHSSDNQLTyVHIPCDYDKEFCMQLDGWDENTSIPAQLKDKNILLYRHAYDKENHHWILKV 79
                    9*****************999887777479**********************************************997 PP



Or compare WP_004242567.1 to CDD or PaperBLAST