PaperBLAST – Find papers about a protein or its homologs

 

Align WP_004583838.1 to PF05656 (DUF805)

WP_004583838.1 has 179 amino acids

Query:       DUF805  [M=111]
Accession:   PF05656.20
Description: Protein of unknown function (DUF805)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.3e-29   87.9  11.2      8e-29   86.6  11.2    1.6  1  WP_004583838.1  


Domain annotation for each sequence (and alignments):
>> WP_004583838.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   86.6  11.2     8e-29     8e-29       1     111 []      11     162 ..      11     162 .. 0.73

  Alignments for each domain:
  == domain 1  score: 86.6 bits;  conditional E-value: 8e-29
          DUF805   1 yfsfsGRarRkeywlfvlfnllvllvlglla...sllgaslsaeavgl.lllvlillvvlalllpslavtvRRlhDigrsgwlillalipii... 88 
                     y++f+GRarRke+wlf+lf+l++l++  ++    +++  ++ + a  + +++v+ +lv++ lllp++avtvRRlhD++rsg +++ +++p +   
  WP_004583838.1  11 YVDFKGRARRKEFWLFTLFYLIALVIPPAVIipiAVIYRHTIDIALCIrICVVVEILVIFSLLLPAYAVTVRRLHDTNRSGLWVIASIVPRVlae 105
                     89******************8875555555545533443444444444578888899999999******************77788888877677 PP

          DUF805  89 ............................gli.......illlvllllpgtpgenrYGp 111
                                                   +       il+lv+++ +gt+genr+Gp
  WP_004583838.1 106 glgvifgqkwliqiaegefptlllinmfL-LlidlcvsILILVMMCERGTEGENRFGP 162
                     77777777666666665555554444430.0345555558888**************8 PP



Or compare WP_004583838.1 to CDD or PaperBLAST