PaperBLAST – Find papers about a protein or its homologs

 

Align WP_009314825.1 to PF13503 (DUF4123)

WP_009314825.1 has 282 amino acids

Query:       DUF4123  [M=119]
Accession:   PF13503.11
Description: Domain of unknown function (DUF4123)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.4e-26   78.1   2.2    3.4e-26   78.1   2.2    1.7  2  WP_009314825.1  


Domain annotation for each sequence (and alignments):
>> WP_009314825.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   78.1   2.2   3.4e-26   3.4e-26       1     118 [.      18     138 ..      18     139 .. 0.83
   2 ?   -2.0   0.2      0.21      0.21      66      66 ..     229     229 ..     187     271 .. 0.64

  Alignments for each domain:
  == domain 1  score: 78.1 bits;  conditional E-value: 3.4e-26
         DUF4123   1 lYallDg.aldpellellealsgeaase.LyagtpeeelaevgPwLveleda..sallr.eeegwgpslgwllaSal..plealaahlrsllqvr 88 
                     lY++lD   + +e ++lle  ++++    Ly gtp+++la++gP+L++l+    + +++ +++  ++++gw laS+   +le+la+h+r +l v+
  WP_009314825.1  18 LYLVLDSdGQLDERDALLEGREPHQY-GnLYSGTPASSLAAIGPYLFRLDALdhP-VIQaLLKSPERHWGW-LASSVssDLESLARHWRTRL-VT 108
                     7******6666666666666666555.45*********************99742.344689*********.5555435999**********.55 PP

         DUF4123  89 lpdgeevllRfydprvlrallqtldeeqrs 118
                     +++ +++l Rf+d+rvl + l++l +eqr 
  WP_009314825.1 109 GERPNQALYRFHDSRVLGRALAHLQPEQRP 138
                     56**************************95 PP

  == domain 2  score: -2.0 bits;  conditional E-value: 0.21
         DUF4123  66 w 66 
                     w
  WP_009314825.1 229 W 229
                     2 PP



Or compare WP_009314825.1 to CDD or PaperBLAST