PaperBLAST – Find papers about a protein or its homologs

 

Align WP_010075684.1 to PF02965 (Met_synt_B12)

WP_010075684.1 has 1220 amino acids

Query:       Met_synt_B12  [M=273]
Accession:   PF02965.22
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   3.2e-116  373.6   0.1   6.1e-116  372.7   0.1    1.5  1  WP_010075684.1  


Domain annotation for each sequence (and alignments):
>> WP_010075684.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  372.7   0.1  6.1e-116  6.1e-116       2     272 ..     932    1201 ..     931    1202 .. 0.97

  Alignments for each domain:
  == domain 1  score: 372.7 bits;  conditional E-value: 6.1e-116
    Met_synt_B12    2 leelveyidWtpffqawelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpansvgddievyadesrseelatlhtLr 94  
                      l+++++yidWt+ff aw++k++yp+i+e++k+++eakklf+dA+a+L+ i++ekl++a++v+g+f+ansvg+dievy++++r++ ++ +++Lr
  WP_010075684.1  932 LSDIRKYIDWTFFFLAWDMKMTYPAIMEHPKYKDEAKKLFDDANAILDVIEKEKLFTANGVLGFFEANSVGEDIEVYTSDKRER-VTIFNMLR 1023
                      899**************************************************************************9998765.799***** PP

    Met_synt_B12   95 qqaekeegepnlclaDfvapkesgvkDyiGlfavtaglgieelakefeaeeDdYsailvkalaDrLaeAfaellhekvrkelWgyakdeklsn 187 
                       q+ +  ++  + l+D++apkes++kDyiG+f+vtag+g+ee+  +f+   DdYsai+vk laDrLaeAfaellh +vrk++Wgyakde+l++
  WP_010075684.1 1024 DQELR-PDNIARNLSDYIAPKESNIKDYIGGFIVTAGIGAEEYSLKFKGMGDDYSAIMVKVLADRLAEAFAELLHIEVRKNYWGYAKDEELTM 1115
                      **776.688999********************************************************************************* PP

    Met_synt_B12  188 eelikekYqGiRpApGYpacpdhsekktlfelldaeekigieLtes.lamtPaasvsGlyfahpeskyFavgkiekdqvedyakrk 272 
                      +e++k +YqGiRpA+GYp++ dhsek++lf+ll+ e+++g++Lte+ ++mtP asv+Glyfa++e+kyF+v+ki+kdqvedy++r 
  WP_010075684.1 1116 KEILKGEYQGIRPAFGYPCLRDHSEKTKLFDLLEGEKNTGVSLTEDgYMMTPGASVCGLYFANKEAKYFDVNKISKDQVEDYTARS 1201
                      ********************************************975899*********************************997 PP



Or compare WP_010075684.1 to CDD or PaperBLAST