PaperBLAST – Find papers about a protein or its homologs

 

Align WP_010901950.1 to PF09301 (DUF1970)

WP_010901950.1 has 477 amino acids

Query:       DUF1970  [M=118]
Accession:   PF09301.14
Description: Domain of unknown function (DUF1970)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    9.1e-18   50.8   0.2    1.8e-17   49.9   0.2    1.5  1  WP_010901950.1  


Domain annotation for each sequence (and alignments):
>> WP_010901950.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   49.9   0.2   1.8e-17   1.8e-17       1     117 [.     111     215 ..     111     216 .. 0.87

  Alignments for each domain:
  == domain 1  score: 49.9 bits;  conditional E-value: 1.8e-17
         DUF1970   1 dkkkllvvvgvllvllliwflwirrrpavdvasnweGrtvivyddptlidriaGevslpvlGyvspssalpnrrasvtgetdvsdavadGadlls 95 
                     ++ +ll v  vllv++++ f+wirrrp+         rt++v+d    i+r+  ++  p+ Gyv+p+  +p    +   ++    avadG++ + 
  WP_010901950.1 111 PRTTLLAVTPVLLVAVPALFVWIRRRPTPTA----ASRTIVVGDTLDEIERLVADIDHPLYGYVCPTV-VPRTPDAAPPHP----AVADGGSDAR 196
                     6899***********************9984....569****************************95.676555555555....6789999999 PP

         DUF1970  96 kltdsitsqlndyasrlddvlv 117
                      l d    +l++  sr++dvlv
  WP_010901950.1 197 ALND--HDRLGGL-SRIEDVLV 215
                     9966..589***9.******98 PP



Or compare WP_010901950.1 to CDD or PaperBLAST