WP_010992701.1 has 551 amino acids
Query: GmrSD_N [M=199]
Accession: PF03235.19
Description: GmrSD restriction endonuclease, N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-33 103.2 0.8 1.1e-33 103.2 0.8 2.8 3 WP_010992701.1
Domain annotation for each sequence (and alignments):
>> WP_010992701.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 103.2 0.8 1.1e-33 1.1e-33 3 198 .. 13 218 .. 11 219 .. 0.67
2 ? -1.6 0.2 0.13 0.13 128 179 .. 231 295 .. 220 304 .. 0.58
3 ? -2.4 2.8 0.23 0.23 151 151 .. 462 462 .. 346 550 .. 0.63
Alignments for each domain:
== domain 1 score: 103.2 bits; conditional E-value: 1.1e-33
GmrSD_N 3 dllskeksg.fliPdyQRgyvWdeeqvedLiedikelrgyplGsivlw.................keaededgkyeviDGQQRltTltlllka.. 77
l+s++++g ++iP +QR++vWd ++ +L+++i ++gyp+G++++w +e +++d v+DGQQRlt+l+ lk+
WP_010992701.1 13 GLISDIEKGqIKIPQFQREFVWDMQKSANLMDSI--IKGYPIGTFIFWktkerlrsvrdvgnislPEPNNGDFVNFVLDGQQRLTSLFASLKGiv 105
6899999999************************..***************************98777888**********************22 PP
GmrSD_N 78 .leedekekeeeeklklekreedkdffekllenekeelesleklkelngkkfkdl................seeekseseknlikayelikekai 155
++r + +d+ + +++ + +e+e+ ++ +n++k + + ++e ++ e++ +++ +++
WP_010992701.1 106 iT---------------RERGRIDDYSNMFIDLNAKEDEQIAITDIENKTKGSYIkitellyggltflasfPPEYLTKLEEYKKRIESYLF---- 181
20...............11222222222222222222222222222222222222222334444344333344444444444444444443.... PP
GmrSD_N 156 eklklveieldseddedeafeiFerlNsrGvpLsaadllkall 198
i+ +e+ d a e+F r+N +G+ L+ ++++ a+
WP_010992701.1 182 -----SIIY-LKEAPLDIATEVFTRINVGGKDLTLFEIMVAKT 218
.....3444.456999**********************99875 PP
== domain 2 score: -1.6 bits; conditional E-value: 0.13
GmrSD_N 128 fkdl.....seeekseseknlikayelikek........aieklklveieldseddedeafeiFe 179
+++l + + ++ s+ +++++++++ +k +++k ++++ + + + ++a e F+
WP_010992701.1 231 YNELidrlrPLNYETISDTTVLQCISTFLTKectrkeilKLNKADFINCWNNGVSAIESAVEYFI 295
33333444444555555566666666665556777664333777777777777777777777776 PP
== domain 3 score: -2.4 bits; conditional E-value: 0.23
GmrSD_N 151 k 151
+
WP_010992701.1 462 D 462
3 PP
Or compare WP_010992701.1 to CDD or PaperBLAST