PaperBLAST – Find papers about a protein or its homologs

 

Align WP_011216157.1 to PF09836 (DUF2063)

WP_011216157.1 has 262 amino acids

Query:       DUF2063  [M=83]
Accession:   PF09836.14
Description: Putative DNA-binding domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-22   66.2   0.0    2.2e-22   65.5   0.0    1.4  1  WP_011216157.1  


Domain annotation for each sequence (and alignments):
>> WP_011216157.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.5   0.0   2.2e-22   2.2e-22       2      82 ..       7      97 ..       6      98 .. 0.89

  Alignments for each domain:
  == domain 1  score: 65.5 bits;  conditional E-value: 2.2e-22
                    XXXXXXXXXX...............XXXXX.X--HHHHHHHHHHHHHHHHHTTTGGGGS-HHHHHHHHHHHHHSGGGG-S-GGGHHHHHHHH CS
         DUF2063  2 lQqaFaaalrdpd..........pglsaae.rlavYrnlvfnnlieaLaaaFpvlrallgeeffdalarafvrahpprspllreygeeFpef 82
                    lQ++F++ + +++          +  s+ e rl++Y++ ++ +lie+Laa++p+l a+lg e+f +l ++++ ++p+  +++r+yg+++pe 
  WP_011216157.1  7 LQTQFQEFIYSGQgsieesivptKLVST-EmRLNIYKDGYRLRLIECLAANYPALYAYLGTEEFAKLSARYIDSYPSAYRSIRWYGDRLPEL 97
                    8*********777889877776333344.26**********************************************************986 PP



Or compare WP_011216157.1 to CDD or PaperBLAST