PaperBLAST – Find papers about a protein or its homologs

 

Align WP_011861251.1 to PF11738 (DUF3298)

WP_011861251.1 has 251 amino acids

Query:       DUF3298  [M=83]
Accession:   PF11738.12
Description: Protein of unknown function (DUF3298)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.5e-26   78.8   3.7    2.5e-26   78.8   3.7    2.5  2  WP_011861251.1  


Domain annotation for each sequence (and alignments):
>> WP_011861251.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -0.4   1.8      0.13      0.13      12      26 ..      91     105 ..      56     148 .. 0.65
   2 !   78.8   3.7   2.5e-26   2.5e-26       3      82 ..     161     244 ..     160     245 .. 0.96

  Alignments for each domain:
  == domain 1  score: -0.4 bits;  conditional E-value: 0.13
         DUF3298  12 ealselikkqlkkqa 26 
                     ++++ + ++++kk++
  WP_011861251.1  91 KKIYSEFQNKMKKED 105
                     344444444444444 PP

  == domain 2  score: 78.8 bits;  conditional E-value: 2.5e-26
         DUF3298   3 lFkpgsdylealselikkqlkkqaeeqeleeyeeleee....fdaddisaydnFyltddgl.vfyfnpYeiaPyaaGaieftiPy 82 
                     +Fk++  y+ a+s++ik+q+++q +++++++y++++++     d++ i++y++Fy++++g  v+ f++Ye+aP+++Ga+ef+iP 
  WP_011861251.1 161 FFKDS-RYIRAISDNIKEQMRNQIKKDDTKSYFIDQDKdspvKDFESINKYQDFYFNKNGNlVISFDEYEVAPGYMGAVEFVIPN 244
                     57777.6*****************************************************************************6 PP



Or compare WP_011861251.1 to CDD or PaperBLAST