WP_015644951.1 has 689 amino acids
Query: GmrSD_N [M=199]
Accession: PF03235.19
Description: GmrSD restriction endonuclease, N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-43 135.0 5.5 1.9e-43 135.0 5.5 4.0 4 WP_015644951.1
Domain annotation for each sequence (and alignments):
>> WP_015644951.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 135.0 5.5 1.9e-43 1.9e-43 5 198 .. 12 217 .. 7 218 .. 0.72
2 ? 1.8 1.3 0.012 0.012 97 169 .. 224 307 .. 219 318 .. 0.62
3 ? -0.6 0.6 0.065 0.065 132 165 .. 402 432 .. 370 525 .. 0.58
4 ? -0.8 4.2 0.079 0.079 116 170 .. 555 644 .. 518 650 .. 0.46
Alignments for each domain:
== domain 1 score: 135.0 bits; conditional E-value: 1.9e-43
GmrSD_N 5 lskeksg.fliPdyQRgyvWdeeqvedLiedike......lrgyplGsivlw.keaededgkyeviDGQQRltTltlllka.......leedeke 84
++++ ++ ++iP yQR y+W +eq+++L++di + + g+++Gsi+ + ++ + +++ + +iDGQQRltT+tlll a k
WP_015644951.1 12 IKDNYKNqLVIPIYQRLYSWGKEQCKQLWDDIIKvggndkMDGHFIGSILYVlNKITHSNNALLIIDGQQRLTTITLLLTAlrnhlsdE---VKR 103
444444459******************************************97777777**********************54443320...444 PP
GmrSD_N 85 keeeeklklekreedkdffekll.enekeelesleklkelngkkfkdlseeekseseknlikayelikek.........ai...eklklveield 166
ke+e+++ ++++++ +++f+ +l e++k++l+sl+++ ++++ se +++++++l++e+ ++ ekl +vei l+
WP_015644951.1 104 KEIEDHYLINSDKDGDKKFRLILsESDKDTLLSLIDK-----------DRRKPSEPSLKIVENFKLFEEWvsntdeletIFkglEKLMIVEIALE 187
4555555554333333333333303333333332222...........223336677777888888888888888887622456999******** PP
GmrSD_N 167 seddedeafeiFerlNsrGvpLsaadllkall 198
+ +d+ + iFe++Ns+G++L+++dl+++++
WP_015644951.1 188 K--GKDDPQLIFESMNSKGMELTQTDLIRNYI 217
5..5669***********************97 PP
== domain 2 score: 1.8 bits; conditional E-value: 0.012
GmrSD_N 97 eedkdffekllenekeelesleklkelngkkfkdlseeekseseknlikayelikek.................aieklklveieldsed 169
e+++ f++k+++ +ee++++ek+ ++ ++ ++ k+++ +n++k+y ++k++ + ++ +i++++e+
WP_015644951.1 224 EKQEGFYNKYWRAMEEEFKQNEKWFDRFIRHYLTI----KTREIPNINKVYVALKDYrqkegigiedllkdlqkY--CGYFCRIVFKKEA 307
56777788888888887777666666555555555....688888888888888887777777777665543321..2344555555444 PP
== domain 3 score: -0.6 bits; conditional E-value: 0.065
GmrSD_N 132 seeekseseknlikayelikekaieklklveiel 165
+++++ +++++++++ +i+ + k+k ++++
WP_015644951.1 402 TNNQRFPKNDEFKDCFITIDFY---KFKKNRYFF 432
4444444444444444444321...111111111 PP
== domain 4 score: -0.8 bits; conditional E-value: 0.079
GmrSD_N 116 sleklkelngkkfkdl........seeekseseknlikayelikek..................................ai.eklklveields 167
lek k +++kk+k++ s ++ ++++++ ++ + +l+++++el++
WP_015644951.1 555 TLEKYKPKKDKKEKKVydlssykfS--------SHSRELFDILSKEikaldekilekfnkmcisykfdtnfvsivplkngGLnLYLNMPFYELQD 641
2333333332222222222222221........11111111111112222222333333334444555566777776666445677888888887 PP
GmrSD_N 168 edd 170
e++
WP_015644951.1 642 EKN 644
766 PP
Or compare WP_015644951.1 to CDD or PaperBLAST