WP_016350686.1 has 723 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-58 183.4 0.0 5.8e-54 168.9 0.0 2.4 2 WP_016350686.1
Domain annotation for each sequence (and alignments):
>> WP_016350686.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 168.9 0.0 5.8e-54 5.8e-54 1 196 [. 174 393 .. 174 394 .. 0.92
2 ! 12.1 0.0 6.6e-06 6.6e-06 79 167 .. 581 673 .. 552 698 .. 0.81
Alignments for each domain:
== domain 1 score: 168.9 bits; conditional E-value: 5.8e-54
UPF0020 1 RgyRvfngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvye.............lkaeaeeear.....ael 77
R yR+ +g+apLke+LAaa++ ++gw gep++DPmCGsGt+l+Eaa ++a++ap l re++++ l+ ea+ +a+ e+
WP_016350686.1 174 RFYRQGTGEAPLKENLAAAMIARSGWA-GEPMMDPMCGSGTLLVEAAFIAADMAPALRRERFGFdrwlqhdselwqsLLMEAQVRAKrgmqrSEV 267
679***********************5.89***********************************************555555555544546788 PP
UPF0020 78 klygsDldrrvvqgareNaekagvgdliefsqadaakLr........lkeg.evdvivtnpPYGerlgskkalekLYseflrelkrvlrgggrlv 163
kl+g D d+rv+ +ar+Na++agv++li+f+qad+++L+ + e+ +v+++++npPYGerlg+ +al + +++++++l r ++g + v
WP_016350686.1 268 KLFGCDADSRVLLKARDNAKAAGVAHLITFKQADVTALEnplpmpavEGEArQVGMLISNPPYGERLGEFPALLEVHQALGDALRRSFQG--WKV 360
8*************************************999999877333348***********************************99..*** PP
UPF0020 164 lltaenkalekaleeralrkvkeknvklglllk 196
++++++ +l ++l+ ra +++ ++n+ l+++l+
WP_016350686.1 361 SILSASPELLSCLRLRADKQYRLFNGALECQLR 393
*****************************9875 PP
== domain 2 score: 12.1 bits; conditional E-value: 6.6e-06
UPF0020 79 lygsDldrrvvqgareNae.kagvgdliefsqadaak.LrlkegevdvivtnpP...YGerlgskkalekLYseflrelkrvlrgggrlvllta 167
+D+ r +++ a++N + + vg + +f+qad k L ++++++d+i +pP +r+++ ++++ + +++ lkr l+ gg lv+ +
WP_016350686.1 581 TTTVDMSRTYLNWAQDNMRlNSLVGREHKFVQADCLKwLSEADEQYDLIFIDPPtfsNSKRMDESFDVQRDHLLLMQHLKRLLAAGGTLVFS-N 673
5679**************94566889999*****9873558999**********6444689999999999999**********996655543.3 PP
Or compare WP_016350686.1 to CDD or PaperBLAST