PaperBLAST – Find papers about a protein or its homologs

 

Align WP_039158226.1 to PF04402 (SIMPL)

WP_039158226.1 has 239 amino acids

Query:       SIMPL  [M=205]
Accession:   PF04402.19
Description: Protein of unknown function (DUF541)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    2.3e-60  190.5   6.9    2.7e-60  190.2   6.9    1.0  1  WP_039158226.1  


Domain annotation for each sequence (and alignments):
>> WP_039158226.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  190.2   6.9   2.7e-60   2.7e-60       1     205 []      33     231 ..      33     231 .. 0.93

  Alignments for each domain:
  == domain 1  score: 190.2 bits;  conditional E-value: 2.7e-60
           SIMPL   1 itVtGeaevevapDlatvslgvetegkdaaeaqaevaervnavlaaLkaaagieekdiqtsglsvspeydy..engkrkitgyrasnsltvtvrd 93 
                     itV+Gea +++apDla++  gv +++k+a+ea +++++++ +vl aLk+a gi+ekd+qts+ls++p+y +  ++g++ ++g+rasn++tv++rd
  WP_039158226.1  33 ITVSGEAMISAAPDLAQIDAGVANDAKSAKEASDANNAAMGKVLLALKGA-GIAEKDYQTSRLSLQPQYGQnkSTGASPVVGFRASNRVTVKIRD 126
                     8***********************************************88.**********************9999****************** PP

           SIMPL  94 ldklgelldaaveaganridgvsfslsdedelrkearaeAvkdArakAealAkalglklgrvvsisesgasggpppppaaaaaaaaaaaaaaaat 188
                     ++k++ ++d++v agan i+++sf+++++++l ++ar++Av dAr+kAe +Aka g++lg+++s+se+   ggp p  +a++a     a +aa+ 
  WP_039158226.1 127 VTKVAGIIDTLVGAGANDIGNISFEVTQASKLLDDAREQAVVDARRKAEIYAKATGVTLGSPLSVSEG---GGPVPLFKARMA----TAPMAAPA 214
                     *******************************************************************3...333333333333....35689999 PP

           SIMPL 189 piepgeitvsasVtvtf 205
                      ++pge t+s++V+v++
  WP_039158226.1 215 AVAPGEETLSVTVNVSW 231
                     999************98 PP



Or compare WP_039158226.1 to CDD or PaperBLAST