PaperBLAST – Find papers about a protein or its homologs

 

Align WP_050417952.1 to PF07044 (DUF1329)

WP_050417952.1 has 437 amino acids

Query:       DUF1329  [M=367]
Accession:   PF07044.15
Description: Protein of unknown function (DUF1329)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    3.7e-74  236.2   0.9    4.2e-74  236.0   0.9    1.0  1  WP_050417952.1  


Domain annotation for each sequence (and alignments):
>> WP_050417952.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  236.0   0.9   4.2e-74   4.2e-74       1     367 []      52     434 ..      52     434 .. 0.92

  Alignments for each domain:
  == domain 1  score: 236.0 bits;  conditional E-value: 4.2e-74
         DUF1329   1 vItaaNveqykdkLsegqkallkkyptyrldVypthrsaaapqevyeatkknatkakldadGnglegavagiPFPi......PktGleviWNhll 89 
                     vI++ Nv++++  L++g+++ +++    ++ V  t+   ++ ++v +atk na+k+kl+a+  +l g+vag PFP+      P++G++++WN+++
  WP_050417952.1  52 VINQGNVANFEGVLDPGMQRYIREGA-VEITVGATTSFDTNKSYV-DATKVNAGKVKLGAKPGELVGYVAGRPFPEepdakdPRAGEKLAWNNRY 144
                     69************************.********9988888888.**************9999*****************************99 PP

         DUF1329  90 ryrg...eaveraiaqaavqasGsvtlvkaeeellfayyy....edkkkelkelenvlfylllevtaParlaGeallvhetldqvkeprdawlYl 177
                      +++    a+++ ++++ ++ sG+v++      ++ +y +    ++ ++ ++++++ ++ ++++v +P+++++++ll++++ d++k  +da+lYl
  WP_050417952.1 145 GMNAydgLAISPFYWKYINMDSGKVERNILFGFHFLKYTHrvsqAPVPEITPNPSKLYRATYVKVYEPQDVKNTQLLIQRYEDDTK-LDDAYLYL 238
                     75543328******************************999998788888999*********************************.9******* PP

         DUF1329 178 pgqRRVRraPelay.DtpqaatgglltlDdldmfnGapdrydwklvgkkemyvpy.........nnykleskklkyadllkpghlnpdlvryelh 262
                       qRRVRr+++ ++ D   a+ g++ +++d++++nG++++++wk+ g+ ++++p            +  e +++ky  + ++g ++p  v ++l+
  WP_050417952.1 239 GFQRRVRRLSTGQTtD---AFLGSDIMIEDFEGYNGRISDMNWKYQGTANILMPFynhndmklsD-EYKEPDGYKYVAFGGKGGCFP-SVTWQLR 328
                     *************879...9**********************************99996666633.3334458899999********.5****** PP

         DUF1329 263 rVwvveAtlkegkrhiyskrvfYlDedswqivaadqYDarGeLwr...vseahlinaydvpav...ws.tlevlyDlqsgrytvdglkneekkve 350
                     +V+++e+++ ++ +h++s+rv Y+D+++  i ++   D++G+Lw+   v+++h+  + +++++    + ++++++D+q++++t+ +lk++ +   
  WP_050417952.1 329 KVHILESSPIDT-NHPVSRRVHYMDAQTSVISMSLVHDRKGDLWKtyvVGWTHPDFHLAKNKGsgiTPfDAFTMIDIQAKHCTTGQLKAQLDA-- 420
                     **********88.**********************************************99998874469*****************999875.. PP

         DUF1329 351 fekkaeeadyftpdaLr 367
                        +  + + f+++++r
  WP_050417952.1 421 ---QMVPVSLFNVQNMR 434
                     ...23345667777765 PP



Or compare WP_050417952.1 to CDD or PaperBLAST