PaperBLAST – Find papers about a protein or its homologs

 

Align WP_050417952.1 to PF07044 (DUF1329)

WP_050417952.1 has 437 amino acids

Query:       DUF1329  [M=368]
Accession:   PF07044.18
Description: Protein of unknown function (DUF1329)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.9e-75  239.1   0.8    5.6e-75  238.9   0.8    1.0  1  WP_050417952.1  


Domain annotation for each sequence (and alignments):
>> WP_050417952.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  238.9   0.8   5.6e-75   5.6e-75       1     367 [.      52     433 ..      52     434 .. 0.92

  Alignments for each domain:
  == domain 1  score: 238.9 bits;  conditional E-value: 5.6e-75
         DUF1329   1 vItaaNvdqykdkLsegqkallkkypsyrldVypthrsaaaPqevyeatkknatkakldadgnglegaaagiPFPi......PktGleviWNhkl 89 
                     vI++ Nv++++  L++g+++ +++    ++ V  t+   ++ ++v +atk na+k+kl+a+  +l g++ag PFP+      P++G++++WN ++
  WP_050417952.1  52 VINQGNVANFEGVLDPGMQRYIREGA-VEITVGATTSFDTNKSYV-DATKVNAGKVKLGAKPGELVGYVAGRPFPEepdakdPRAGEKLAWNNRY 144
                     69************************.*********999999999.**************9999*****************************99 PP

         DUF1329  90 ryrg...eaveraiaqaavqanGsvtlvkaeqelvfaeyy....edakkelkelenvlfylllevtaParlaGeallvhetldqvkeprqawlYl 177
                      +++    a+++ ++++ ++ +G+v++      +++++ +    ++ ++ ++++++ ++ ++++v +P+++++++ll++++ d++k  ++a+lYl
  WP_050417952.1 145 GMNAydgLAISPFYWKYINMDSGKVERNILFGFHFLKYTHrvsqAPVPEITPNPSKLYRATYVKVYEPQDVKNTQLLIQRYEDDTK-LDDAYLYL 238
                     65543328******************************99999888888999**********************************.9******* PP

         DUF1329 178 pgqRRVRraPtlay.DtpqaaadglrtlDdldmfnGapdrydwklvgkkemyipy........nnykleskklkyedilkpghlnpdlvryelhr 263
                      +qRRVRr++t ++ D   a+ +++ +++d++++nG++++++wk+ g+ ++++p         ++   e +++ky  + ++g ++p  v ++l++
  WP_050417952.1 239 GFQRRVRRLSTGQTtD---AFLGSDIMIEDFEGYNGRISDMNWKYQGTANILMPFynhndmklSDEYKEPDGYKYVAFGGKGGCFP-SVTWQLRK 329
                     *************879...9**********************************999966666333334567899999********.5******* PP

         DUF1329 264 VwvveAtlkegkrhiysKrvfYlDedswqilaadqYDarGeLwr...vseahlinaydvpag...ws.tlevlyDlqsgrytvdglkneekkkve 351
                     V+++e+ + ++ +h++s+rv Y+D+++ +i ++   D++G+Lw+   v+++h+  + ++++g    + ++++++D+q++++t+ +lk++ + ++ 
  WP_050417952.1 330 VHILESSPIDT-NHPVSRRVHYMDAQTSVISMSLVHDRKGDLWKtyvVGWTHPDFHLAKNKGsgiTPfDAFTMIDIQAKHCTTGQLKAQLDAQMV 423
                     *********88.**********************************************99998864469*****************999875422 PP

         DUF1329 352 fekkaeeadyftpdaL 367
                             + f+++++
  WP_050417952.1 424 ------PVSLFNVQNM 433
                     ......2345666665 PP



Or compare WP_050417952.1 to CDD or PaperBLAST