PaperBLAST – Find papers about a protein or its homologs

 

Align WP_054616435.1 to PF13503 (DUF4123)

WP_054616435.1 has 245 amino acids

Query:       DUF4123  [M=119]
Accession:   PF13503.11
Description: Domain of unknown function (DUF4123)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.6e-24   71.2   1.1    8.1e-24   70.4   1.1    1.4  1  WP_054616435.1  


Domain annotation for each sequence (and alignments):
>> WP_054616435.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   70.4   1.1   8.1e-24   8.1e-24       1     112 [.      23     136 ..      23     142 .. 0.92

  Alignments for each domain:
  == domain 1  score: 70.4 bits;  conditional E-value: 8.1e-24
         DUF4123   1 lYallDgaldpellellealsgeaase.LyagtpeeelaevgPwLveledasallr.eeegwgpslgwllaSalplealaahlrsllqvrlpdge 93 
                     l+a++  a++ e  ++++++  ++a   ++a+t+++e+ +v+P++  ++ +  +l+  ++   +++gwl +S+++lea+++hlrsl+q+ lp+  
  WP_054616435.1  23 LFAIFSNASAAEPFKAWQRSLTAQAPSpIWADTAYAEWEAVMPFVGIVAADGGFLEwVAATESRDWGWLAISSASLEAVVDHLRSLTQALLPNND 117
                     6999*************99999998889*****************988888555555899999******************************** PP

         DUF4123  94 evllRfydprvlrallqtl 112
                      v++Rf+d r l ++lq+ 
  WP_054616435.1 118 KVFFRFWDGRYLLPMLQST 136
                     ****************975 PP



Or compare WP_054616435.1 to CDD or PaperBLAST