PaperBLAST – Find papers about a protein or its homologs

 

Align WP_068612997.1 to PF04402 (SIMPL)

WP_068612997.1 has 252 amino acids

Query:       SIMPL  [M=205]
Accession:   PF04402.18
Description: Protein of unknown function (DUF541)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    6.5e-59  185.7   9.5    7.8e-59  185.5   9.5    1.1  1  WP_068612997.1  


Domain annotation for each sequence (and alignments):
>> WP_068612997.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  185.5   9.5   7.8e-59   7.8e-59       1     205 []      45     249 ..      45     249 .. 0.94

  Alignments for each domain:
  == domain 1  score: 185.5 bits;  conditional E-value: 7.8e-59
           SIMPL   1 itVtGeaevevapDlatvtlgvetegkdaaeaqaevaervnavlaalkaaagieekdiqtsglsvspeydy.kngkrkitgyrasqsltvtvrdl 94 
                     i+VtG++ev ++pD+a++++gve+++++a+eaq++ a+++++++++lk+  +i++ diqtsg++v+p+y+y +++ +k++gy as++l+v+ r+l
  WP_068612997.1  45 INVTGSGEVFIKPDIAYLSIGVEAQAATAQEAQKATAAQIAKLTNLLKNTWKIDAADIQTSGFYVQPNYTYnDKEGQKLKGYNASHTLQVKYRQL 139
                     89**********************************************9999******************************************* PP

           SIMPL  95 dklgelldalveaganridgvsfslsdedelreearkeAvkdArakAealAkalgvklgrvvsisesgasgapppppaamaaaaaaaaaaaaatp 189
                     dk+g+lld++ ++ganrid+v+f+++++d+++e+++++A+++A  kA  +Ak + ++ g+v+s+s  g s+ap+   +++  ++++a+ +aa+  
  WP_068612997.1 140 DKIGQLLDDASKNGANRIDNVRFTVENPDQYQEQVINKALANAELKAGIIAKGVKRQMGAVLSVSQAGVSSAPM-YEQNYLVMEKSASNSAADSA 233
                     ******************************************************************65555444.34455555555899999*** PP

           SIMPL 190 iepgeitvsasVtvtf 205
                     +epg+i+v+ + +v++
  WP_068612997.1 234 VEPGQIKVTTTLNVQY 249
                     **************97 PP



Or compare WP_068612997.1 to CDD or PaperBLAST