PaperBLAST – Find papers about a protein or its homologs

 

Align WP_074058480.1 to TIGR00110

WP_074058480.1 has 612 amino acids

Query:       TIGR00110  [M=543]
Accession:   TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   4.6e-252  823.3   0.9   5.4e-252  823.0   0.9    1.0  1  WP_074058480.1  


Domain annotation for each sequence (and alignments):
>> WP_074058480.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  823.0   0.9  5.4e-252  5.4e-252       2     542 ..      18     606 ..      17     607 .. 0.98

  Alignments for each domain:
  == domain 1  score: 823.0 bits;  conditional E-value: 5.4e-252
       TIGR00110   2 arallkatGlkdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkaha 96 
                     aral++atG++d d++kPiia++ns+t++vPghvhlkdl++lv++eie+ Ggvakef+tiav+DGiamgh+Gm+ysLpsreiiaDsve++v+ah+
  WP_074058480.1  18 ARALWRATGMRDGDFHKPIIAIANSFTQFVPGHVHLKDLGQLVAREIERVGGVAKEFDTIAVDDGIAMGHDGMLYSLPSREIIADSVEYMVNAHC 112
                     79********************************************************************************************* PP

       TIGR00110  97 lDalvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacl 191
                     +Dalv+is+CDki+PGmlmaalrlniP+++vsGGpmeagktklse  +++d+++a++ +a++  s+e++ e+ersacPt+gsCsG+ftansm+cl
  WP_074058480.1 113 ADALVCISNCDKITPGMLMAALRLNIPTVFVSGGPMEAGKTKLSE--HKLDLIDAMVIAADDSASDEKVAEFERSACPTCGSCSGMFTANSMNCL 205
                     ******************************************977..589********************************************* PP

       TIGR00110 192 tealGlslPgsstllatsaekkelakksgkrivelvkknik.......PrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfd 279
                     tealGlslPg++t+ at+a++++l+ ++g+  vel+++ +        Pr i+t eafena+tld+a+GGstnt+Lhlla+a+e ++ + + d+d
  WP_074058480.1 206 TEALGLSLPGNGTVVATHADREQLFLRAGRVAVELCHRWYGgedptalPRGIATFEAFENAMTLDIAMGGSTNTILHLLAAAQEGEIPFGMRDID 300
                     **************************************9999999999*********************************************** PP

       TIGR00110 280 rlsrkvPllaklkPsgkkv.iedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr............................. 344
                     rls++vP+l+k++P++ k+ ied+hraGG++a+l+el + gllh++a tv  +tla+ +++ +v++                             
  WP_074058480.1 301 RLSKRVPQLCKVAPNTPKYhIEDVHRAGGIMAILGELARGGLLHTNAATVHARTLADAIAQWDVTQtdaetvhtfykagpagiptqiafsqatrw 395
                     ****************9998********************************************999**************************** PP

       TIGR00110 345 ......vdqd..virsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmr 431
                              +  +ir + +++++egglavL+Gn+a +G+vvk+agv+e+i +feG+a+v+es++ a+++il+ +vk+Gd+vviryeGPkGgPGm+
  WP_074058480.1 396 dsldtdR--SegCIRDVAHAFSQEGGLAVLYGNIARDGCVVKTAGVDESIHVFEGNARVYESQDSAVKGILADEVKAGDIVVIRYEGPKGGPGMQ 488
                     **77444..256*********************************************************************************** PP

       TIGR00110 432 emLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldlevseeelaerrakakkkea.......r 519
                     emL+Pts+l++ GLgk++aL+tDGrfsGgt+GlsiGh sPeaa+gGai+lv+dGDki iDi+nr ++l +s+eela rra++++k++       r
  WP_074058480.1 489 EMLYPTSYLKSKGLGKQCALLTDGRFSGGTSGLSIGHASPEAAAGGAISLVRDGDKILIDIPNRSINLLISDEELALRRAEQDAKGWkpvevrpR 583
                     ***************************************************************************************9****999 PP

       TIGR00110 520 evkgaLakyaklvssadkGavld 542
                     +v  aL++ya l++sadkGav+d
  WP_074058480.1 584 KVTTALKAYALLATSADKGAVRD 606
                     9********************98 PP



Or compare WP_074058480.1 to CDD or PaperBLAST