WP_115313349.1 has 378 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-61 194.2 0.0 1.4e-61 193.8 0.0 1.2 1 WP_115313349.1
Domain annotation for each sequence (and alignments):
>> WP_115313349.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 193.8 0.0 1.4e-61 1.4e-61 1 196 [. 161 367 .. 161 368 .. 0.96
Alignments for each domain:
== domain 1 score: 193.8 bits; conditional E-value: 1.4e-61
UPF0020 1 RgyRvfngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvye............lkaeaeeear..aelklyg 81
RgyR ++g+ap+ketLAa+l+rla+wk ++pl+DP+CGsGti+IEa+l+++niapg++refv+e l++ea + a+ +e+++y+
WP_115313349.1 161 RGYRLAQGEAPIKETLAASLIRLANWKGDTPLIDPFCGSGTIAIEACLIAQNIAPGFNREFVSEewnimppniydrLRDEADQMANydKEIEVYA 255
9***********************************************************************************99777888*** PP
UPF0020 82 sDldrrvvqgareNaekagvgdliefsqadaakLrlkegevdvivtnpPYGerlgskkalekLYseflrelkrvlrgggrlvlltaenkalekal 176
sD+d+++v+ a++Nae+ g++d+i+f +d+ L+ +++e ++v+npPYGer+g+ ++e++Y+ +++ +k++ +++++++nk++e ++
WP_115313349.1 256 SDIDPEMVDIAKRNAEEVGLSDIIQFGIKDVNTLTIDKEEPVALVGNPPYGERIGDRDEVEEMYRYIGTLMKQHPFL---SAYILTSNKEFEYLV 347
***********************************6666666*******************************6555...89************* PP
UPF0020 177 eeralrkvkeknvklglllk 196
+++a++++k++n++++++++
WP_115313349.1 348 NRKATKRRKLFNGYIECTYY 367
*****************986 PP
Or compare WP_115313349.1 to CDD or PaperBLAST