PaperBLAST – Find papers about a protein or its homologs

 

Align WP_248432800.1 to PF02965 (Met_synt_B12)

WP_248432800.1 has 895 amino acids

Query:       Met_synt_B12  [M=273]
Accession:   PF02965.21
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
   2.8e-133  429.5   0.0     5e-133  428.7   0.0    1.4  1  WP_248432800.1  


Domain annotation for each sequence (and alignments):
>> WP_248432800.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  428.7   0.0    5e-133    5e-133       2     273 .]     608     879 ..     607     879 .. 0.97

  Alignments for each domain:
  == domain 1  score: 428.7 bits;  conditional E-value: 5e-133
    Met_synt_B12   2 leelveyidWtpffqaWelkgkypkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpAnseg.ddievyadesrseelatlhtLrq 95 
                     l+elv++idWtpffq+Wel gkyp+il+de vg++a++lf+dAq+mL++i++ek+l+ak+++g+fpAn+e+ ddi++y  + ++++ +t+  Lrq
  WP_248432800.1 608 LSELVDFIDWTPFFQSWELFGKYPAILTDEIVGQQASDLFEDAQKMLQQIVNEKWLTAKGIMGIFPANTENdDDITLYPTT-DNRQPTTFISLRQ 701
                     89*******************************************************************96388***9555.456679******* PP

    Met_synt_B12  96 qaekeegkpnlclaDfvapkesgvkDyiGlFavtaglgieelakefeaekddYsailvkaladrLaeAfaellhekvrkelWgyakdeklsneel 190
                     q++k++g+pn++laDf+apkesg++DyiG+F+vt+g+g++e+a+efe++ ddY++ilvkal drLaeAfae+lh kvrke+Wgya+deklsne+l
  WP_248432800.1 702 QSQKTAGAPNIALADFIAPKESGIQDYIGCFCVTTGFGVDEKASEFEKQLDDYNSILVKALGDRLAEAFAEYLHLKVRKEIWGYASDEKLSNEDL 796
                     *********************************************************************************************** PP

    Met_synt_B12 191 ikekYqgiRpApGYpacpdhtekktlfelldaeekigieLteslamtPaasvsGlyfahpearyFavgkiekdqvedyakrkg 273
                     ike+Y+giRpApGYpacpdh ek t+++ll++eekig++Ltes+am+Pa+svsG+yfahpe++yF++gki+kdqvedyakr++
  WP_248432800.1 797 IKENYTGIRPAPGYPACPDHLEKPTIWKLLNVEEKIGVKLTESMAMWPASSVSGYYFAHPESKYFGLGKIKKDQVEDYAKRRN 879
                     *********************************************************************************96 PP



Or compare WP_248432800.1 to CDD or PaperBLAST