XP_001032676.1 has 794 amino acids
Query: CCDC113_CCDC96_CC [M=177]
Accession: PF13870.11
Description: CCDC113/CCDC96, coiled-coil
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.1e-44 136.2 36.0 5.1e-44 136.2 36.0 4.7 5 XP_001032676.1
Domain annotation for each sequence (and alignments):
>> XP_001032676.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.9 0.4 0.27 0.27 97 120 .. 73 96 .. 67 103 .. 0.56
2 ? -4.3 4.6 0.69 0.69 102 135 .. 373 407 .. 339 412 .. 0.60
3 ? 0.8 10.3 0.019 0.019 87 139 .. 445 497 .. 428 500 .. 0.83
4 ? -0.1 7.7 0.037 0.037 76 118 .. 524 567 .. 505 580 .. 0.51
5 ! 136.2 36.0 5.1e-44 5.1e-44 3 176 .. 597 770 .. 595 771 .. 0.99
Alignments for each domain:
== domain 1 score: -2.9 bits; conditional E-value: 0.27
CCDC113_CCDC96_CC 97 kkelkerqeklaklrkelyevkle 120
++e++++q+ +++ ++++ e +++
XP_001032676.1 73 QNEYDSQQDSQQQGHDQVNEMHQD 96
444555555555555555555554 PP
== domain 2 score: -4.3 bits; conditional E-value: 0.69
CCDC113_CCDC96_CC 102 erqeklaklrkelyevkler.dklrkqnkklkkqg 135
+ +e+++k ++ l + ++er ++ +++ k+lk++
XP_001032676.1 373 DEKERIRKEQEILAHEEQERkEREENDAKRLKQSR 407
45555555555554444443145556666666654 PP
== domain 3 score: 0.8 bits; conditional E-value: 0.019
CCDC113_CCDC96_CC 87 hmlsekleelkkelkerqeklaklrkelyevklerdklrkqnkklkkqggllr 139
++ +++ ++ ++++ + +e +++l+ ++e++ ++d qn+kl+++ ll+
XP_001032676.1 445 QEQNQQAAQQQQDTISNKEIRQELEMAITEAQRQHDEFMLQNHKLQEEIKLLK 497
444556667777888889999*************************9988876 PP
== domain 4 score: -0.1 bits; conditional E-value: 0.037
CCDC113_CCDC96_CC 76 vhala.hlkeklhmlsekleelkkelkerqeklaklrkelyevk 118
vh++ lk+ +++++el+k+l+++q+k ++++ e+k
XP_001032676.1 524 VHQIRlDLKQTQTRYNQMSQELQKKLEQKQKKCNEIKYAFLELK 567
22222134444444455555555555555555555544444443 PP
== domain 5 score: 136.2 bits; conditional E-value: 5.1e-44
CCDC113_CCDC96_CC 3 akrnelsklrlelitlkhtlakiqeklekkeelgegLtlidFeqlqienqalsekieernkeLkrlkkkvtktvhalahlkeklhmlsekle 94
+k +el++lrl++++l++ + k q+ l+kkeel+egL+lidFeql+ienq+l+ekieern+eL++lkkk t+t+++l+h++ekl +++ ++
XP_001032676.1 597 QKSKELQELRLQILRLRNAYVKNQKILKKKEELAEGLHLIDFEQLKIENQTLNEKIEERNEELHKLKKKNTTTIQILTHTREKLGFVQGENG 688
899***************************************************************************************** PP
CCDC113_CCDC96_CC 95 elkkelkerqeklaklrkelyevklerdklrkqnkklkkqggllrvPaLleDYdktkeeveekrksvkkLrrkvkilekrik 176
el+++ ++++l+++rk+l+++k+++dklr n lk+q+g+++ ++L +DY + +v +++++ k L++k++++ ++ik
XP_001032676.1 689 ELNSQNVRKDQELDDMRKQLTQQKKTKDKLRSVNLTLKQQTGIVNSEELGQDYRDLRTRVSKLEEEKKRLEQKLRSMHEAIK 770
****************************************************************************999987 PP
Or compare XP_001032676.1 to CDD or PaperBLAST