XP_001259090.1 has 354 amino acids
Query: DUF1749 [M=299] Accession: PF08538.14 Description: Protein of unknown function (DUF1749) Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1e-101 326.0 0.0 1.3e-101 325.7 0.0 1.0 1 XP_001259090.1 Domain annotation for each sequence (and alignments): >> XP_001259090.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 325.7 0.0 1.3e-101 1.3e-101 7 298 .. 12 348 .. 4 349 .. 0.95 Alignments for each domain: == domain 1 score: 325.7 bits; conditional E-value: 1.3e-101 DUF1749 7 pgllheyaerlvafeyetsgelkskallFigGLgdGlltvpyvkelanaldeagwsvvelqlsssyggwGtgsLkrDaeeieklveYlkktk... 98 pg+lh+y+e lv+fey+t+++ k+++llF+gGLgdGl t +y+ +la+al++++ws++ l+l+ssy +wG g L+rD++ei+++++Y+k++k XP_001259090.1 12 PGILHHYTETLVTFEYTTTTTRKPHSLLFVGGLGDGLATTSYLADLAHALQPTEWSLFTLTLTSSYQSWGLGHLDRDTNEIAQCLKYIKEYKadk 106 79****************************************************************************************99888 PP DUF1749 99 .sGeekkekvvlmGHstGsqdvlyYltssnekd.............rekvdgailqapvsDReailkviee..........rkklkelvalakkl 169 +G+ + k+vlmGHstGsq vl+Yl+++n+++ r +dgai+qapvsDReai+ v+ e r ++++l +a++ XP_001259090.1 107 fGGSASGGKIVLMGHSTGSQCVLHYLSRPNPHThtpafdpslehieRMPLDGAIMQAPVSDREAIQWVLAEglgdrtpaeiRPVFEKLTIMAREA 201 777999************************9779***********9999********************************99******9**999 PP DUF1749 170 .vdkgkaeeil.prelaekvgl.etpvsarRflsLasvd.....gdDDfFssDlsdeklektfGkike......pllillsekDefvpekvdkee 250 d++ + ++l p +++ v+ +tp+sarRflsL+s++ ++DD+FssDlsde+l ktfG+i+e +l++l+s+ D++vp++vdke XP_001259090.1 202 aRDAEAGTDVLlPLAMTSLVYPaHTPLSARRFLSLTSPEsplspSEDDLFSSDLSDEQLGKTFGMIREqgllrgKLMVLFSGADQSVPAWVDKEG 296 778888888752777776666589*************************************************99******************** PP DUF1749 251 llerwkeavk....kkewseesGiikgAsHnveeesaeeaqkelvervlsfl 298 ll+rw +a++ + w+e+sGii++AsH++++++++e ++ lv++vl +l XP_001259090.1 297 LLSRWGKATDhngeAEIWDENSGIIPNASHALSNDDQAEPRNFLVDKVLRYL 348 *********99988789********************************998 PP
Or compare XP_001259090.1 to CDD or PaperBLAST