PaperBLAST – Find papers about a protein or its homologs

 

Align XP_001390557.1 to PF08550 (DUF1752)

XP_001390557.1 has 568 amino acids

Query:       DUF1752  [M=28]
Accession:   PF08550.14
Description: Fungal protein of unknown function (DUF1752)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    4.5e-15   41.6   3.8    8.4e-15   40.7   3.8    1.5  1  XP_001390557.1  


Domain annotation for each sequence (and alignments):
>> XP_001390557.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   40.7   3.8   8.4e-15   8.4e-15       1      28 []     164     191 ..     164     191 .. 0.98

  Alignments for each domain:
  == domain 1  score: 40.7 bits;  conditional E-value: 8.4e-15
         DUF1752   1 lWkvytkckdslpngeRLENlSWRlWnk 28 
                     +W++++ +++ ++ng RLEN+SWR+W+k
  XP_001390557.1 164 SWRYVVARRNVYDNGTRLENASWRTWAK 191
                     8*************************97 PP



Or compare XP_001390557.1 to CDD or PaperBLAST