PaperBLAST – Find papers about a protein or its homologs

 

Align XP_001589362.1 to PF06722 (EryCIII-like_C)

XP_001589362.1 has 456 amino acids

Query:       EryCIII-like_C  [M=145]
Accession:   PF06722.16
Description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-22   66.0   0.0    2.9e-22   65.3   0.0    1.3  1  XP_001589362.1  


Domain annotation for each sequence (and alignments):
>> XP_001589362.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   65.3   0.0   2.9e-22   2.9e-22      11     131 ..     309     431 ..     301     443 .. 0.91

  Alignments for each domain:
  == domain 1  score: 65.3 bits;  conditional E-value: 2.9e-22
  EryCIII-like_C  11 DaEivva..ldedarpdlrelpdnvRlvdfvPlgvllptcaaivHhgGagstltalsfGvPqvvlpdeadaavrarrvaelGagivlskdeltsd 103
                     D+ ++va  +++ + p   ++p nv + df+P +++lp c+++v +gG gs   +l+ GvP v+ +d+ +++  a r    Gag+ +++ +   +
  XP_001589362.1 309 DTLVIVAlgIKNASLPASVKIPSNVHVEDFIPYDDILPYCDVLVTNGGYGSFRHGLINGVPMVIGGDTQEKPETAARCEWAGAGVNMRTGKPSVQ 403
                     55567762246677888999*************************************************************************** PP

  EryCIII-like_C 104 siakavaevvedpayraaaaklaeeiaa 131
                      ++++v++v++d+ y++   ++++e+ +
  XP_001589362.1 404 LLRDSVEKVLADQKYKNKVMEIKAEMDS 431
                     *************************976 PP



Or compare XP_001589362.1 to CDD or PaperBLAST