XP_001729274.1 has 589 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.9e-213 695.2 0.5 3.5e-213 694.9 0.5 1.1 1 XP_001729274.1
Domain annotation for each sequence (and alignments):
>> XP_001729274.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 694.9 0.5 3.5e-213 3.5e-213 2 542 .. 36 588 .. 35 589 .] 0.96
Alignments for each domain:
== domain 1 score: 694.9 bits; conditional E-value: 3.5e-213
TIGR00110 2 arallkat.Gl.kdedlekPiiavvnsyteivPghvhlkdlaklvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvka 94
++a+l+at G+ +dedl + +++v++ + e +P++ hl +++++++++++aG + +f+t++vsDGi+mg++ m ysLpsr++iaDsve+ + +
XP_001729274.1 36 SQAMLYAThGIqSDEDLRRAMVGVASVWYEGNPCNAHLLGVGQRIRDSLDRAGLTGYQFGTVGVSDGISMGTSAMSYSLPSRDLIADSVESCMGG 130
789999875762589******************************************************************************** PP
TIGR00110 95 halDalvvissCDkivPGmlmaalrlniPaivvsGGpmeagktkl.sekidlvdvfeavgeyaagk.ls..eeeleeiersacPtagsCsGlfta 185
h+lD+ vv++ CDk++PG+lma rln+P i+v+GG++ +g+ + +d+v++f+++g+y a+ e+ +++ +r+acP++g+C+G++ta
XP_001729274.1 131 HWLDGCVVVPGCDKNMPGVLMALGRLNRPGIMVYGGTIRPGHCGSiTGTLDIVSAFQSYGQYLASGgTPdaEKIRYDTVRHACPGPGACGGMYTA 225
******************************************9754889************977541331133467899**************** PP
TIGR00110 186 nsmacltealGlslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdr 280
n+ma+ +e+lG++lPgss+++a +ekk+ ++++g ++ l++kni+Prdi+t++afe+a++l ++lGGstn+vLhlla+a+++gv+ls+ddf+r
XP_001729274.1 226 NTMASCAEVLGMTLPGSSSFPAEYNEKKAECDSIGPTMRMLLEKNIRPRDIMTRSAFEDAMVLTMVLGGSTNAVLHLLAMARSVGVDLSIDDFQR 320
*********************************************************************************************** PP
TIGR00110 281 lsrkvPllaklkPsgkkviedlhra.GGvsavlkeldkegllhkdaltvtGktlaetlekvkvlr....vdqdvirsldnpvkkegglavLkGnl 370
+s+ +P la+lkPsg++v+ed+h + GG+++v+++l +++l++ + +tvtG+tl e+ e+ r +dqdv+r++d+p+k++g+++vL+Gnl
XP_001729274.1 321 VSDSTPFLANLKPSGQYVMEDVHTVlGGIPSVVHYLIENKLMKGEHMTVTGRTLRENCEQWVAERgpmpKDQDVLRPIDKPIKRTGHIRVLYGNL 415
***********************976*********************************99887777779************************* PP
TIGR00110 371 aeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGd..vvviryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrG 463
a+ Ga++ki+g+e l+f+G+a+vf+ e+++++a+ +g +k+G+ vv++ry+GPkGgPGm+emL+Pts ++g+GLg++va +tDGrfsGg++G
XP_001729274.1 416 APGGAIAKITGKEG--LEFTGKARVFDTEDDMVHAVEQGTIKKGEktVVILRYKGPKGGPGMPEMLKPTSLIMGAGLGHDVACLTDGRFSGGSHG 508
**************..9***************************999************************************************ PP
TIGR00110 464 lsiGhvsPeaaegGaialvedGDkikiDienrkldl.evseeelaerrakakkkearevkgaLakyaklvssadkGavld 542
++iGhv+Pea egG+ialv+dGD+i+iD+ n+ +++ +vs+eela+rra+++++ +g L ky++lvs+a++G+v+d
XP_001729274.1 509 FVIGHVVPEAQEGGPIALVRDGDEITIDAVNNSIQInNVSDEELAQRRAAWQPRPLTVNQGGLYKYTRLVSNASQGCVTD 588
***********************************945****************************************97 PP
Or compare XP_001729274.1 to CDD or PaperBLAST