PaperBLAST – Find papers about a protein or its homologs

 

Align XP_002310754.3 to PF05057 (DUF676)

XP_002310754.3 has 283 amino acids

Query:       DUF676  [M=217]
Accession:   PF05057.18
Description: Putative serine esterase (DUF676)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-09   23.9   0.0      2e-09   23.3   0.0    1.2  1  XP_002310754.3  


Domain annotation for each sequence (and alignments):
>> XP_002310754.3  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   23.3   0.0     2e-09     2e-09       3     103 ..      25     121 ..      23     134 .. 0.86

  Alignments for each domain:
  == domain 1  score: 23.3 bits;  conditional E-value: 2e-09
          DUF676   3 kkdhLvVlvHGlegnsadleyvkeqlekkeklpdelivvlmsennesktfkgidvlgerlaeevlevvkkkkdkikkiSfvghSlGgliaryaig 97 
                     k+++ +VlvHG    +  ++  k+ le    +++  +  l+ ++++ k  +++++l e   e +le++ + + k +k+ +vghSlGgl  + a+ 
  XP_002310754.3  25 KNQKHFVLVHGACHGAWCWQKFKTLLES--ASNRVTVLDLAASGANMKAIQDVETLDE-YTEPLLEFLASLQPK-EKVILVGHSLGGLSLALAME 115
                     4556689****99999999999999999..8899999999999************987.568999****99999.8**************99999 PP

          DUF676  98 klkekk 103
                     k  ek 
  XP_002310754.3 116 KFPEKI 121
                     988664 PP



Or compare XP_002310754.3 to CDD or PaperBLAST