XP_002340488.1 has 1008 amino acids
Query: DUF747 [M=315] Accession: PF05346.15 Description: Eukaryotic membrane protein family Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.9e-130 419.8 7.4 6.7e-130 419.4 7.4 1.2 1 XP_002340488.1 Domain annotation for each sequence (and alignments): >> XP_002340488.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 419.4 7.4 6.7e-130 6.7e-130 2 315 .] 465 891 .. 464 891 .. 0.96 Alignments for each domain: == domain 1 score: 419.4 bits; conditional E-value: 6.7e-130 DUF747 2 sssekadllklllilvsviilsklDaSrlYHsirgqsviKLyvifnvLEvaDkLlsslgqdildalfstat.....kskskllrlillfilalvy 91 +s +kad+lk++li++++i+ls++DaSr+YH+irgq++iKLyvi+nvLEv D+Lls++gqd+l++lfs++ + +sk++r+++lf lal+y XP_002340488.1 465 ESDDKADILKGSLIICTCIVLSYFDASRMYHWIRGQNAIKLYVIYNVLEVGDRLLSAIGQDVLECLFSQEAldrgkDGRSKVVRPFWLFWLALAY 559 57899*****************************************************************987776367**************** PP DUF747 92 vvlHslvllyqvvtLnVavnSysnaLltLLlsnqfvEiKssVFKkfekenlfqltcaDvvERfqlllllliialrnlvels.............. 172 +++H+++l+yqvvtLnVavnSysnaL+tLLlsnqfvEiKs+VFKkfekenlfqltcaDvvERfql+l+l+iia rn+ve++ XP_002340488.1 560 TTVHATALFYQVVTLNVAVNSYSNALITLLLSNQFVEIKSTVFKKFEKENLFQLTCADVVERFQLWLMLTIIASRNIVETGaftswftvgqgvsd 654 *******************************************************************************99************** PP DUF747 173 .......................................ssssseeellgellsplllvlgsEvlvDwlKHafitkFNkikpsvYrkfldvlakd 228 +++ +l ++l+p+l+vlgsE++vDwlKHa+i+kFN+ +p++Y +fldvlakd XP_002340488.1 655 qirssvtnstplttsprsstsilpqsftflpstfftsltGGANTLLPQLAQVLGPFLIVLGSEMFVDWLKHAYIAKFNNTRPAIYGRFLDVLAKD 749 ***********************************9998667788999*********************************************** PP DUF747 229 llssrkkkafvdqseklarrlGlpvlplavlfirvllqtlkmllatsl............................................... 276 ++++ af+dq+ l++rlGl+v+p+a+lf+rv++qt++m+l++ l XP_002340488.1 750 YYTN----AFIDQN--LTKRLGLAVIPMACLFFRVSVQTYQMFLQALLpmqasstehsasltamhehysnlpqpssptlpltvqsvmsnsfdrls 838 ***9....9****9..****************************7666*********************************************** PP DUF747 277 ...............kllslltallllllvflillllklllgilllkvarkrve 315 + +++ +++l+l +lill++kl+lgilll+++r+r++ XP_002340488.1 839 wlfntivenaipspiQSVTF-FTIVLVLTGYLILLIFKLTLGILLLTFSRSRYK 891 ************87555555.455556667********************9985 PP
Or compare XP_002340488.1 to CDD or PaperBLAST