XP_002895220.1 has 561 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-211 689.8 2.5 1.2e-205 670.1 1.9 2.0 2 XP_002895220.1
Domain annotation for each sequence (and alignments):
>> XP_002895220.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 18.6 0.0 2.9e-08 2.9e-08 2 28 .. 56 82 .. 55 87 .. 0.93
2 ! 670.1 1.9 1.2e-205 1.2e-205 70 542 .. 89 560 .. 84 561 .] 0.99
Alignments for each domain:
== domain 1 score: 18.6 bits; conditional E-value: 2.9e-08
TIGR00110 2 arallkatGlkdedlekPiiavvnsyt 28
++a+l+atG+++ed++kP++++++ ++
XP_002895220.1 56 SQAMLYATGMTEEDMDKPQVGIASMWW 82
79**********************998 PP
== domain 2 score: 670.1 bits; conditional E-value: 1.2e-205
TIGR00110 70 gheGmkysLpsreiiaDsvetvvkahalDalvvissCDkivPGmlmaalrlniPaivvsGGpmeagktklsekidlvdvfeavgeyaagklseee 164
g++Gm ysL+sr++iaDs+etv+ ++++Da+++i+ CDk++PG ++a++r+n+P+++v+GG++ ag + +e +d+v++f+a+gey ag+++eee
XP_002895220.1 89 GTDGMSYSLQSRDLIADSIETVMGGQWYDANICIPGCDKNMPGCVIAMARVNRPSLMVYGGTIRAGCSSKGETLDVVSAFQAYGEYIAGRITEEE 183
89********************************************************************************************* PP
TIGR00110 165 leeiersacPtagsCsGlftansmacltealGlslPgsstllatsaekkelakksgkrivelvkknikPrdiltkeafenaitldlalGGstntv 259
+++i r+acP+ag+C+G++tan+ma++ e+lGlslP ss+++a s ek++ + ++g+ i+ l++k+ikP dil++eafenait+ +alGGstn+v
XP_002895220.1 184 RHDIIRHACPGAGACGGMYTANTMATAIETLGLSLPFSSSFPADSPEKQNECLQAGEAIKVLLEKDIKPLDILSREAFENAITVTMALGGSTNAV 278
*********************************************************************************************** PP
TIGR00110 260 LhllaiakeagvklslddfdrlsrkvPllaklkPsgkkviedlhraGGvsavlkeldkegllhkdaltvtGktlaetlekvkvlrvdqdvirsld 354
Lhl+aia+ a++ ls++df+r+s++vP la+lkPsgk v+ed+hr+GG++avlk+l ++g+++ d+ltvtGktlae+lekv l ++++i+++d
XP_002895220.1 279 LHLIAIARAANIPLSINDFERISERVPFLADLKPSGKFVMEDIHRVGGTPAVLKYLMTQGYINGDCLTVTGKTLAENLEKVADLSDNHEIIHPVD 373
************************************************************************************999******** PP
TIGR00110 355 npvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvkeGdvvviryeGPkGgPGmremLaPtsalvglGLgkkv 449
p+k+ g+l++L+G+la+eG+v+ki+g+e l+f+G+akv++ ee++++++ +g++++G vv+iryeGPkGgPGm+emLaPtsa++g+GLgk+v
XP_002895220.1 374 RPLKSSGHLRILRGDLAPEGSVAKITGKEG--LVFTGTAKVYDCEEDMMAGLEKGEITKGSVVIIRYEGPKGGPGMPEMLAPTSAIMGAGLGKDV 466
******************************..9************************************************************** PP
TIGR00110 450 aLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkldl.evseeelaerrakakkkearevkgaLakyaklvssadkGavld 542
a++tDGrfsGg++G++iGh++Pea +gG+ialv++GDki++D+e++++dl +v eela+r+++++++ + ++g+L k+ k v+sa++G+v+d
XP_002895220.1 467 AMLTDGRFSGGSHGFIIGHITPEAQVGGPIALVKNGDKITVDAEQNRIDLiNVTAEELAQRKKEWVAPPLKATRGTLYKFIKNVKSASEGCVTD 560
*************************************************659****************************************97 PP
Or compare XP_002895220.1 to CDD or PaperBLAST