XP_003347103.1 has 359 amino acids
Query: MAT1-1-2 [M=146] Accession: PF17043.9 Description: Mating type protein 1-1-2 of unknown function Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.8e-38 117.7 0.0 3.4e-38 116.8 0.0 1.4 1 XP_003347103.1 Domain annotation for each sequence (and alignments): >> XP_003347103.1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 116.8 0.0 3.4e-38 3.4e-38 42 145 .. 136 257 .. 121 258 .. 0.92 Alignments for each domain: == domain 1 score: 116.8 bits; conditional E-value: 3.4e-38 MAT1-1-2 42 sia.ddeaeeaPakefglvqne......vkvsdqgkkllvkvagdenwrvaplwHPlrrvPGspWnkFirNtq......lplF.....teserkp 118 s++ + +a+e+P+kefglv+++ +v ++k+++v +ag+ nw+v++++HPlrrvPG+pW+kF++N++ l+lF ++s+r++ XP_003347103.1 136 SLTiHKDAQEIPGKEFGLVCGKevhvlgGHVVRRSKRDVVGQAGGVNWHVDHTHHPLRRVPGTPWHKFFGNVEvepnkpLHLFgdftsPKSDRNG 230 44446778**************9**99977899********************************************999999************ PP MAT1-1-2 119 kakikyilPesalvladefeseyeevr 145 ++k+ +i+Pe+a++++de++se+++v+ XP_003347103.1 231 HRKFPVIIPETAMFIQDEISSEHQQVA 257 ************************997 PP
Or compare XP_003347103.1 to CDD or PaperBLAST