PaperBLAST – Find papers about a protein or its homologs

 

Align XP_004287466.1 to PF05553 (DUF761)

XP_004287466.1 has 219 amino acids

Query:       DUF761  [M=36]
Accession:   PF05553.15
Description: Cotton fibre expressed protein
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.6e-14   39.6   0.5    3.3e-14   38.5   0.5    1.5  1  XP_004287466.1  


Domain annotation for each sequence (and alignments):
>> XP_004287466.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   38.5   0.5   3.3e-14   3.3e-14       2      28 ..     183     209 ..     182     211 .. 0.92

  Alignments for each domain:
  == domain 1  score: 38.5 bits;  conditional E-value: 3.3e-14
          DUF761   2 eevDakAEaFIakFreqlrLQRqeSik 28 
                      +vD+ AE+FI++F+++l+LQ+  S +
  XP_004287466.1 183 SQVDKEAEEFIKRFYKDLKLQKRTSAL 209
                     68*********************9986 PP



Or compare XP_004287466.1 to CDD or PaperBLAST