XP_004444760.1 has 1659 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.7e-13 35.4 0.1 1.3e-11 31.1 0.0 2.4 2 XP_004444760.1
Domain annotation for each sequence (and alignments):
>> XP_004444760.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 1.7 0.0 0.014 0.014 4 41 .. 625 662 .. 622 678 .. 0.81
2 ! 31.1 0.0 1.3e-11 1.3e-11 60 160 .. 775 879 .. 760 880 .. 0.80
Alignments for each domain:
== domain 1 score: 1.7 bits; conditional E-value: 0.014
Cas_Cas4 4 kinyyliCkrklwlfsh.eitmeeeselvelGklihees 41
+ + C+r++ l + + t e ++ +v+ G ++he
XP_004444760.1 625 VVADSFTCQRRAVLQDRiKATSEASKPQVY-GHILHEIF 662
5667789********998999999999999.*****933 PP
== domain 2 score: 31.1 bits; conditional E-value: 1.3e-11
Cas_Cas4 60 vkkekeklvvvevKkskkie.eaaklQllyYlllLe.kkgieak.Gvleypkekkreevelteedreeleeaikeieeiisse..kppepkkkki 149
+ +k+ +v+ e+K +++ + e +++Q + Y llL+ + +i+++ G+l+y++ k+ +v ++ +++ + ++ ++++ pp k+ +i
XP_004444760.1 775 TE-QKTLTVPLELKTGRNTTnETHRAQTALYTLLLSdRYDIDVTfGILYYLEASKTHRVRAIPAEIRQMIQQRNRLAGYVRERldLPPMLKNPRI 868
44.6777889******98761566************9**********************98777776666666666666665544677778888* PP
Cas_Cas4 150 CkkCayaelCl 160
C++C + C+
XP_004444760.1 869 CNQCYAKTPCF 879
****9999897 PP
Or compare XP_004444760.1 to CDD or PaperBLAST