XP_005844252.1 has 1102 amino acids
Query: TIGR00110 [M=543]
Accession: TIGR00110
Description: ilvD: dihydroxy-acid dehydratase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.7e-207 674.2 0.4 1.5e-205 669.7 0.3 2.0 2 XP_005844252.1
Domain annotation for each sequence (and alignments):
>> XP_005844252.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 5.7 0.0 0.00024 0.00024 2 21 .. 396 415 .. 395 417 .. 0.92
2 ! 669.7 0.3 1.5e-205 1.5e-205 43 530 .. 414 903 .. 408 909 .. 0.98
Alignments for each domain:
== domain 1 score: 5.7 bits; conditional E-value: 0.00024
TIGR00110 2 arallkatGlkdedlekPii 21
++a+l+atGl++ed++kP++
XP_005844252.1 396 SQAMLYATGLREEDMSKPQV 415
79****************98 PP
== domain 2 score: 669.7 bits; conditional E-value: 1.5e-205
TIGR00110 43 lvkeeieaaGgvakefntiavsDGiamgheGmkysLpsreiiaDsvetvvkahalDalvvissCDkivPGmlmaalrlniPaivvsGGpmeagkt 137
+vk+++e+aG v +fnti+vsDGi+mg++Gm ysL+sr+iiaDs+etv++a+++Da++ ++ CDk++PG +ma++r+n+P+++++GG++++g
XP_005844252.1 414 QVKAGVEEAGLVGLRFNTIGVSDGISMGTDGMSYSLQSRDIIADSIETVMSAQWYDANISLPGCDKNMPGTIMAMARVNRPSLMIYGGTIKPGYS 508
799******************************************************************************************99 PP
TIGR00110 138 kl..sekidlvdvfeavgeyaagklseeeleeiersacPtagsCsGlftansmacltealGlslPgsstllatsaekkelakksgkrivelvkkn 230
kl + +d+v++f++ g yaag ++e+++ +i+r++cP++g+C+G++tan+ma++ ealG++lP+ss+++a + k+ ++ +g+++ el++++
XP_005844252.1 509 KLgdGATLDVVSAFQSFGGYAAGLITEDQRCDIVRNSCPGPGACGGMYTANTMASAIEALGMALPYSSSTPAEDPLKRVECRLAGRYVLELLRRD 603
995566899************************************************************************************** PP
TIGR00110 231 ikPrdiltkeafenaitldlalGGstntvLhllaiakeagvklslddfdrlsrkvPllaklkPsgkkviedlhraGGvsavlkeldkegllhkda 325
+kPrdi+t +afena++l++a+GGstn+vLhl+a+a+ +++l+lddf+r+s++vP +a+lkPsgk+v+ed+h++GG++a+lk+l++++l++ +
XP_005844252.1 604 VKPRDIMTLAAFENAMVLVMATGGSTNAVLHLIAMARACELDLTLDDFQRVSDRVPFIADLKPSGKYVMEDVHKVGGTPAILKYLHQHNLVDGTC 698
*********************************************************************************************** PP
TIGR00110 326 ltvtGktlaetlekvkvlrvdqdvirsldnpvkkegglavLkGnlaeeGavvkiagveedilkfeGpakvfeseeealeailggkvk.eGdvvvi 419
ltvtGktlae+l++ + lr++qdvi +ld p+k+ g+l++L+Gnl++eG+v ki+g+e l+feG+a f+ ee++l+a+ + + + +G vvvi
XP_005844252.1 699 LTVTGKTLAENLATCPGLREGQDVILPLDAPIKSSGHLQILYGNLSPEGSVGKITGKEG--LVFEGRALCFDCEEDMLAALEQDQEQfKGSVVVI 791
***********************************************************..9*******************98765449****** PP
TIGR00110 420 ryeGPkGgPGmremLaPtsalvglGLgkkvaLitDGrfsGgtrGlsiGhvsPeaaegGaialvedGDkikiDienrkld.levseeelaerraka 513
ryeGPkGgPGm+emL+Ptsa++g+GLg+++aLitDGrfsGg++G++iGhv Pea egG+ialv++GD+i+iD+e r++d l+v+++ela+rr ++
XP_005844252.1 792 RYEGPKGGPGMPEMLTPTSAIMGAGLGNDCALITDGRFSGGSHGFVIGHVCPEAQEGGPIALVKNGDTIRIDAETRAMDiLHVDDAELARRRTEW 886
*******************************************************************************558************* PP
TIGR00110 514 kkkearevkgaLakyak 530
+++ + +g+L ky k
XP_005844252.1 887 TAPPLKARQGTLYKYIK 903
***************76 PP
Or compare XP_005844252.1 to CDD or PaperBLAST