Align XP_006511872.1 to PF12012 (DUF3504)

XP_006511872.1 has 777 amino acids

Query:       DUF3504  [M=162]
Accession:   PF12012.13
Description: Domain of unknown function (DUF3504)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      3e-67  211.8   0.5      3e-67  211.8   0.5    2.2  3  XP_006511872.1  


Domain annotation for each sequence (and alignments):
>> XP_006511872.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   -2.2   0.2       0.2       0.2      62      77 ..      89     109 ..      52     140 .. 0.56
   2 ?   -3.7   0.2      0.61      0.61      66      85 ..     413     432 ..     399     454 .. 0.47
   3 !  211.8   0.5     3e-67     3e-67       2     161 ..     601     759 ..     600     760 .. 0.95

  Alignments for each domain:
  == domain 1  score: -2.2 bits;  conditional E-value: 0.2
         DUF3504  62 eketylrylep.....ekkae 77 
                     ++e+ +++++p     + +++
  XP_006511872.1  89 QQEQQIQVQQPqqvqvQVQVQ 109
                     344445555552221111111 PP

  == domain 2  score: -3.7 bits;  conditional E-value: 0.61
         DUF3504  66 ylrylepekkaeakkrkkee 85 
                     ++++  p+++ ++++ ++++
  XP_006511872.1 413 TVHIWDPQQQPQQQTAQEQT 432
                     44444442222222222221 PP

  == domain 3  score: 211.8 bits;  conditional E-value: 3e-67
         DUF3504   2 vsrveEeeLWeskqLgadsPivLLntllyfntkyfnlrtveehlkLsfsnverqskknpr...eketylrylepekkaeakkrkkeeedenkvve 93 
                      s+v+Ee+LWe+kqLga+sP++LL+tl++fntkyf l+tv++h+kL+fs+v rq+kk+p+   +k+t++ryl+      +++ +k ++d  ++ e
  XP_006511872.1 601 PSHVTEEMLWECKQLGAHSPSTLLTTLMFFNTKYFLLKTVDQHMKLAFSKVLRQTKKSPSnpkDKSTSIRYLKA--LGIHQTGQKVTDD--MYAE 691
                     699******************************************************9999999*********9..5555666666666..8*** PP

         DUF3504  94 qaensenplrCpvkLyelylskcPesvkerkdvFYlqpeksvvpesplWyssqplgkesLesmlkril 161
                     q+en+enplrCp+kLy++yl+kcP+svk r+d+FYl+pe++v+p+sp+Wys qp+++e++ +ml+ril
  XP_006511872.1 692 QTENPENPLRCPIKLYDFYLFKCPQSVKGRNDTFYLTPEPVVAPNSPIWYSVQPISREQMGQMLTRIL 759
                     *******************************************************************8 PP

Or compare XP_006511872.1 to CDD or PaperBLAST