PaperBLAST – Find papers about a protein or its homologs

 

Align XP_009388526.2 to PF15697 (DUF4666)

XP_009388526.2 has 107 amino acids

Query:       DUF4666  [M=111]
Accession:   PF15697.9
Description: Domain of unknown function (DUF4666)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.3e-32   99.0   1.7    1.7e-32   98.7   1.7    1.1  1  XP_009388526.2  


Domain annotation for each sequence (and alignments):
>> XP_009388526.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.7   1.7   1.7e-32   1.7e-32       1     109 [.       1     100 [.       1     103 [. 0.79

  Alignments for each domain:
  == domain 1  score: 98.7 bits;  conditional E-value: 1.7e-32
         DUF4666   1 magLqRSsttFRRsGSSGlvwderllkeeeeeeeeakeeeaeeeeeevkelrhsrsvgsig..slersrsnggsaqrafrtkkvsPavdPpSPkv 93 
                     magLqRS ttFRRsGSSG+vwder+++ + ++ ++      ee+++e++elrhs+s++s    ++ rs s+gg  ++afr+  vsP +dPpSP++
  XP_009388526.2   1 MAGLQRSVTTFRRSGSSGVVWDERFFSGDLSRMRK------EEAAAEFSELRHSKSMASSIrrTTARSGSTGG--RHAFRASFVSPGIDPPSPRF 87 
                     9*************************855444332......23567999*******99864225666677777..789***************85 PP

         DUF4666  94 sacilCgifgkkeksk 109
                        i+Cg++g +++++
  XP_009388526.2  88 ---ICCGFLGTSRSAQ 100
                     ...6777777666655 PP



Or compare XP_009388526.2 to CDD or PaperBLAST