PaperBLAST – Find papers about a protein or its homologs

 

Align XP_010111922.1 to PF05553 (DUF761)

XP_010111922.1 has 180 amino acids

Query:       DUF761  [M=36]
Accession:   PF05553.15
Description: Cotton fibre expressed protein
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.7e-09   23.5   4.4    4.5e-09   22.1   4.4    1.8  1  XP_010111922.1  


Domain annotation for each sequence (and alignments):
>> XP_010111922.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   22.1   4.4   4.5e-09   4.5e-09       4      22 ..     155     173 ..     153     178 .. 0.93

  Alignments for each domain:
  == domain 1  score: 22.1 bits;  conditional E-value: 4.5e-09
          DUF761   4 vDakAEaFIakFreqlrLQ 22 
                     +D++AE+FIakFr ++  Q
  XP_010111922.1 155 IDERAEQFIAKFRAEMEVQ 173
                     9***************988 PP



Or compare XP_010111922.1 to CDD or PaperBLAST