XP_011542496.1 has 1321 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.21
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1e-118 381.8 0.0 1.7e-118 381.1 0.0 1.3 1 XP_011542496.1
Domain annotation for each sequence (and alignments):
>> XP_011542496.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 381.1 0.0 1.7e-118 1.7e-118 1 273 [] 1021 1302 .. 1021 1302 .. 0.98
Alignments for each domain:
== domain 1 score: 381.1 bits; conditional E-value: 1.7e-118
Met_synt_B12 1 dleelveyidWtpffqaWelkgky.....pkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpAnsegddievyades...rse 85
dl++lv+yidW+pff +W+l+gky pki++d++vg ea+k+++dA++mL+++i++k+l+a++vvg++pA+s +ddi++ya+ + +e
XP_011542496.1 1021 DLQKLVDYIDWKPFFDVWQLRGKYpnrgfPKIFNDKTVGGEARKVYDDAHNMLNTLISQKKLRARGVVGFWPAQSIQDDIHLYAEAAvpqAAE 1113
699*********************999999*****************************************************8887655677 PP
Met_synt_B12 86 elatlhtLrqqaeke..egkpnlclaDfvapkesgvkDyiGlFavtaglgieelakefeaekddYsailvkaladrLaeAfaellhekvrkel 176
+at++ Lrqqaek+ +++p++cl+Df+ap +sg++Dy+GlFav++ +g+eel k++e++ ddYs+i+vkal drLaeAfae lhe+vr+el
XP_011542496.1 1114 PIATFYGLRQQAEKDsaSTEPYYCLSDFIAPLHSGIRDYLGLFAVAC-FGVEELSKAYEDDGDDYSSIMVKALGDRLAEAFAEELHERVRREL 1205
99**********9997788999*************************.********************************************* PP
Met_synt_B12 177 WgyakdeklsneelikekYqgiRpApGYpacpdhtekktlfelldaeekigieLteslamtPaasvsGlyfahpearyFavgkiekdqvedya 269
W y e+l++ +l + +Y+giRpApGYp++pdhtek t+++l d+e+++gi+Lteslam Pa++vsGlyf++ +++yFavgki+kdqvedya
XP_011542496.1 1206 WAYCGSEQLDVADLRRLRYKGIRPAPGYPSQPDHTEKLTMWRLADIEQSTGIRLTESLAMAPASAVSGLYFSNLKSKYFAVGKISKDQVEDYA 1298
********************************************************************************************* PP
Met_synt_B12 270 krkg 273
rk+
XP_011542496.1 1299 LRKN 1302
**96 PP
Or compare XP_011542496.1 to CDD or PaperBLAST