XP_011863749.1 has 474 amino acids
Query: UPF0020 [M=197]
Accession: PF01170.22
Description: Putative RNA methylase family UPF0020
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3e-39 120.9 0.0 8.4e-39 119.4 0.0 1.7 1 XP_011863749.1
Domain annotation for each sequence (and alignments):
>> XP_011863749.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 119.4 0.0 8.4e-39 8.4e-39 7 178 .. 264 411 .. 259 428 .. 0.95
Alignments for each domain:
== domain 1 score: 119.4 bits; conditional E-value: 8.4e-39
UPF0020 7 ngpapLketLAaalvrlagwkdgepllDPmCGsGtilIEaallganiapgllrefvyelkaeaeeearaelklygsDldrrvvqgareNaekagv 101
+gp++L++t+ + l++la+ k g+ ++DPmCG+G+i+IEa l + + + + D+d+r+v+++++N + +v
XP_011863749.1 264 FGPTTLRSTICYNLLKLANPKLGDIIVDPMCGGGSIPIEATLAYPHLY------------------------VLCGDNDSRAVDRSKSNMDASTV 334
579*********************************************........................89********************* PP
UPF0020 102 gdliefsqadaakLrlkegevdvivtnpPYGerlgskkalekLYseflrelkrvlrgggrlvlltaenkalekalee 178
g +i+++q+ a kL+ k++ vd++vt++P+G+r g+k ++ +Y++fl el r+++++gr+vllt ++ ++++al
XP_011863749.1 335 GCKIDLVQWTASKLPFKDSFVDIVVTDMPFGKRSGNKSYNKIFYKQFLLELGRMVKSNGRIVLLTYDRCNFKDALMA 411
***************88889****************************************************99865 PP
Or compare XP_011863749.1 to CDD or PaperBLAST