XP_011960415.2 has 1252 amino acids
Query: Met_synt_B12 [M=273]
Accession: PF02965.22
Description: Vitamin B12 dependent methionine synthase, activation domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.2e-121 388.5 0.0 1.5e-120 387.7 0.0 1.4 1 XP_011960415.2
Domain annotation for each sequence (and alignments):
>> XP_011960415.2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 387.7 0.0 1.5e-120 1.5e-120 1 273 [] 952 1233 .. 952 1233 .. 0.98
Alignments for each domain:
== domain 1 score: 387.7 bits; conditional E-value: 1.5e-120
Met_synt_B12 1 dleelveyidWtpffqawelkgky.....pkiledekvgeeakklfkdAqamLkkiieekllkakavvglfpansvgddievyades...rse 85
dl++lv+yidW+pff++w+l+gky pki++d++vgeea+k+++dAq+mL+ +i++k+l+a++vvg++pa+s +ddi++ya+ + se
XP_011960415.2 952 DLQKLVDYIDWKPFFDVWQLRGKYpnrgfPKIFDDKTVGEEARKVYDDAQSMLQALISQKKLQARGVVGFWPAQSLQDDIHLYAEGAvpqASE 1044
699*********************99999******************************************************8876655788 PP
Met_synt_B12 86 elatlhtLrqqaeke..egepnlclaDfvapkesgvkDyiGlfavtaglgieelakefeaeeDdYsailvkalaDrLaeAfaellhekvrkel 176
+at++ Lrqqaek+ +++p+lcl+Dfvap +sg+ Dy+Glfav++ +g+eel k++e+e DdYs+i+vkal DrLaeAfae lhe+vr+el
XP_011960415.2 1045 PIATFYGLRQQAEKDsaSSDPYLCLSDFVAPLHSGIPDYLGLFAVAC-FGVEELSKAYEEECDDYSSIMVKALGDRLAEAFAEELHERVRREL 1136
9************997788999*************************.********************************************* PP
Met_synt_B12 177 WgyakdeklsneelikekYqGiRpApGYpacpdhsekktlfelldaeekigieLteslamtPaasvsGlyfahpeskyFavgkiekdqvedya 269
Wgy + e+l + +l + +Y+GiRpApGYp++pdh+ek t+++l d+e+++gi+Lteslam Pa++vsGlyf++ +skyFavgki+kdq+edya
XP_011960415.2 1137 WGYCSGEQLAVADLRRLRYEGIRPAPGYPSQPDHTEKLTMWRLADVEQRTGIRLTESLAMAPASAVSGLYFSNLKSKYFAVGKISKDQIEDYA 1229
********************************************************************************************* PP
Met_synt_B12 270 krkg 273
+rk+
XP_011960415.2 1230 SRKN 1233
**96 PP
Or compare XP_011960415.2 to CDD or PaperBLAST