PaperBLAST – Find papers about a protein or its homologs

 

Align XP_012047969.1 to PF13926 (DUF4211)

XP_012047969.1 has 712 amino acids

Query:       DUF4211  [M=137]
Accession:   PF13926.10
Description: Domain of unknown function (DUF4211)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    5.9e-33  100.1   0.0    1.7e-32   98.6   0.0    1.8  1  XP_012047969.1  


Domain annotation for each sequence (and alignments):
>> XP_012047969.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   98.6   0.0   1.7e-32   1.7e-32       1     137 []     399     534 ..     399     534 .. 0.91

  Alignments for each domain:
  == domain 1  score: 98.6 bits;  conditional E-value: 1.7e-32
         DUF4211   1 dFiveddddelgepeelplefsrkskkklkehFkdvvewlvhnaidpdflk.slekkddelylvalkklddevkgladsllsssaWkpeFkkale 94 
                     +Fiv+d +++l+e   lp efsr++ ++++ +F++v+++++  a++ +     l kk++e++ ++l +l++++k+++++++ s++W++e ++ le
  XP_012047969.1 399 NFIVDDGSQPLAEDL-LPPEFSRNALQSTEYKFRVVFHYFLLLAMKGAKHVlPLDKKTREYFGPPLADLRRRMKDYQNNRVRSQVWSRELVQILE 492
                     6******99999997.*****************************88754203455*************************************** PP

         DUF4211  95 arPelevteleaeeksCdACnrskhpatfevrlsGkpYnketl 137
                     ++P+++++ ++++e++CdACn s++  t++v + G+pY+ket+
  XP_012047969.1 493 KYPCFRTE-YTGAEMGCDACNISGRIGTITVTIGGEPYDKETF 534
                     ******55.5777777*************************96 PP



Or compare XP_012047969.1 to CDD or PaperBLAST