XP_012048550.1 has 462 amino acids
Query: DUF2408 [M=130]
Accession: PF10303.13
Description: Protein of unknown function (DUF2408)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-57 179.8 0.0 1.6e-40 124.9 0.0 4.5 4 XP_012048550.1
Domain annotation for each sequence (and alignments):
>> XP_012048550.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 9.9 0.0 6e-05 6e-05 4 120 .. 8 130 .. 5 137 .. 0.69
2 ! 124.9 0.0 1.6e-40 1.6e-40 2 130 .] 191 313 .. 190 313 .. 0.95
3 ! 24.3 0.0 2.1e-09 2.1e-09 38 120 .. 316 391 .. 314 392 .. 0.92
4 ! 25.5 0.0 8.8e-10 8.8e-10 3 93 .. 369 455 .. 367 462 .] 0.90
Alignments for each domain:
== domain 1 score: 9.9 bits; conditional E-value: 6e-05
DUF2408 4 lspelepiyekLvsirrsllslatrskkesk....keelkelkkeLkeieskrdeegkfassetke.......vvekgqavlngLlddCldlved 87
+++e p++e L++ir l++l ++++ + +++ k+++++++ rde+++ +s + ++ + + +++Ll+d + l++
XP_012048550.1 8 VPQEELPVLEALINIRNRLTALKKDTTRFIRapdvMPIYNSVVKQITRLNAIRDEQQQSHSALNPApgsstkpPPPPEANRVDQLLADVFGLLSL 102
6788889***************9998887443666333444555566666666665555555443344455556666689999999999999998 PP
DUF2408 88 lkakkeseekkldpklqpiYekLleikttLenL 120
+ + + + +iY + ++++ L ++
XP_012048550.1 103 FFLTV-----GKSRETPAIYCQIASMRQILSHM 130
88773.....23566677888888888777765 PP
== domain 2 score: 124.9 bits; conditional E-value: 1.6e-40
DUF2408 2 eelspelepiyekLvsirrsllslatrskkeskkeelkelkkeLkeieskrdeegkfassetkevvekgqavlngLlddCldlvedlkakkesee 96
+ ls el pi+++Lv++r++l++la+++k++ k+e k++ +eL++ +skr + gkf ++v++gqa+l+gLl+ C+++++d+ka++ e
XP_012048550.1 191 TVLSVELVPIHQRLVQLRKELAALAAEPKPN--KAEYKAILEELRKTDSKRVD-GKFLGPG-GSSVPEGQALLSGLLETCFEITQDIKARE--AE 279
67899**************************..********************.***6655.599*************************6..66 PP
DUF2408 97 kkldpklqpiYekLleikttLenLllTrrWtLRE 130
+++ p+l+piY++L+e+k++L++++lT+rWtLRE
XP_012048550.1 280 EEVGPSLKPIYDRLSEMKNQLDQMTLTHRWTLRE 313
8********************************9 PP
== domain 3 score: 24.3 bits; conditional E-value: 2.1e-09
DUF2408 38 lkelkkeLkeieskrdeegkfassetkevvekgqavlngLlddCldlvedlkakkeseekkldpklqpiYekLleikttLenL 120
l ++ L+ei+++r + gkf++ ++ + +gq l Ll++C l+ l ++ ++ ++++l pi +kL++ik+ L+++
XP_012048550.1 316 LYNYAMALREIDAMRVD-GKFVDADG--NKAEGQYALMFLLRRCYGLIYRLMSE----SEPISEELLPIANKLSTIKKCLNEV 391
5567889*********9.****9999..8899********************99....579*****************99875 PP
== domain 4 score: 25.5 bits; conditional E-value: 8.8e-10
DUF2408 3 elspelepiyekLvsirrsllslatrskkeskkeelkelkkeLkeieskrdeegkfassetkevvekgqavlngLlddCldlvedlkakke 93
+s+el pi +kL +i++ l +++ + + +l ++ L++i+s r++ gkf ++++ + ++gqa+l l + ++l+e lk++ +
XP_012048550.1 369 PISEELLPIANKLSTIKKCLNEVLKYGGPY-TPRDLYPYHLALHQIDSLRKD-GKFYADDG--SIPEGQAILVAQLSEAHELLEMLKESMS 455
5899****************9999887775.799*****************9.***99999..99*********************99864 PP
Or compare XP_012048550.1 to CDD or PaperBLAST