PaperBLAST – Find papers about a protein or its homologs

 

Align XP_012165473.2 to PF14924 (MAP10_N)

XP_012165473.2 has 435 amino acids

Query:       MAP10_N  [M=144]
Accession:   PF14924.12
Description: Microtubule associated protein 10, N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
      2e-13   36.7   0.8    3.1e-13   36.1   0.1    1.7  2  XP_012165473.2  


Domain annotation for each sequence (and alignments):
>> XP_012165473.2  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.1   0.1   3.1e-13   3.1e-13      40     144 .]     106     212 ..      73     212 .. 0.75
   2 ?   -3.4   0.1      0.48      0.48      81     107 ..     282     307 ..     270     317 .. 0.60

  Alignments for each domain:
  == domain 1  score: 36.1 bits;  conditional E-value: 3.1e-13
         MAP10_N  40 rdeeikfnaGksclFamtpkeLvkklksfpleleVfkkdeeek....kvpigeteiplsgclcdlia.easkdaeelpksktvkdtfdLvdeggn 129
                      d+   f +G+s++Fa  + ++v+  k  +l ++++  +++ +    +v+ig  e+++s+++  l + +++++ +  p +k+++++  ++  ++n
  XP_012165473.2 106 ADDIEYFFCGRSVMFAIDQYTVVN--KDLDLIIKLCVEKKMPEcvkpNVLIGNGELDISKHFAALRKeMLQCWHKMAPPPKVFEGEVPVIY-NEN 197
                     34445799****************..67777777666555545568*****************99872567777777**********9986.568 PP

         MAP10_N 130 pvGsislelrlsclG 144
                      +G+i++++r+s +G
  XP_012165473.2 198 TIGDICMFVRISAFG 212
                     9*************9 PP

  == domain 2  score: -3.4 bits;  conditional E-value: 0.48
         MAP10_N  81 ek.kvpigeteiplsgclcdliaeaskd 107
                     ++  +pig+t    ++  c++i+e ++ 
  XP_012165473.2 282 TPcGQPIGAT--LKPNVSCKQISEVTPV 307
                     4456677763..3455667888777765 PP



Or compare XP_012165473.2 to CDD or PaperBLAST